Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
1
vote
2
replies
983
views
Comment: Comment: Removing duplicates
5 weeks ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
983
views
Comment: Comment: Removing duplicates
5 weeks ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
601
views
Comment: Comment: Porechop demulitplexing of nanopore sequencing data and barcode bins for each sa
7 months ago by samuel.a.odonnell ▴ 520
1
vote
0
replies
1.2k
views
Comment: Comment: Short Read Data Genome Assembly
8 months ago by samuel.a.odonnell ▴ 520
1
vote
1
reply
1.1k
views
Comment: Comment: The GATK "The given bam input has no sample names." error
9 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
890
views
Comment: Comment: investigate the inversions in comparison of assembled genome with reference geno
9 months ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
890
views
Comment: Comment: investigate the inversions in comparison of assembled genome with reference geno
9 months ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
554
views
Comment: Comment: Expect heterozygous variant from reads
10 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
901
views
Comment: Comment: vg: Mapping fewer reads to a genome graph than a linear reference
12 months ago by samuel.a.odonnell ▴ 520
1
vote
1
reply
1.9k
views
Comment: Comment: How to rerun Guppy Basecalling (with both fast5_pass and fast5_fail)
13 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
1.0k
views
Comment: Comment: MissAssembly Correction
14 months ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
1.0k
views
Comment: Comment: MissAssembly Correction
15 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
557
views
Answer: Answer: scaffold assembly inro chromosomal assembly using reference genome
15 months ago by samuel.a.odonnell ▴ 520
2
votes
1
reply
1.1k
views
Comment: Comment: Problem with NextDenovo fungal assembly
16 months ago by samuel.a.odonnell ▴ 520
1
vote
0
replies
467
views
Comment: Comment: Tools for annotating predicted genes?
16 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
1.4k
views
Comment: Comment: minimap2, before or after assembly?
17 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
849
views
Comment: Comment: Filtering mitochondrion reads from FastQ files
18 months ago by samuel.a.odonnell ▴ 520
1
vote
0
replies
1.2k
views
Comment: Comment: How to fix long read from ONT : ERROR: Invalid char while reading fastq.gz file
18 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
1.5k
views
Comment: Comment: Low basecalling of raw ONT data
19 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
1.0k
views
Comment: Comment: Assembly size is double the genome size despite specifying --genome-size in flye
19 months ago by samuel.a.odonnell ▴ 520
2
votes
1
reply
679
views
Comment: Comment: Why SNPs with read depth > 100 or 200 were removed?
19 months ago by samuel.a.odonnell ▴ 520
2
votes
0
replies
889
views
Comment: Comment: Help with geom_dotplot() script
20 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
784
views
Comment: Comment: How can I make a reference genome from multiple genomes?
20 months ago by samuel.a.odonnell ▴ 520
4
votes
1
reply
583
views
assembly based phylogeny
whole-genome phylogenetics assembly
updated 20 months ago by ★ 1.2k • written 20 months ago by ▴ 520
2
votes
1
reply
843
views
Answer: Answer: How do I input one fasta file for an entire reference genome?
20 months ago by samuel.a.odonnell ▴ 520
1
vote
1
reply
583
views
Comment: Comment: Unexpected coverage across genome
21 months ago by samuel.a.odonnell ▴ 520
1
vote
0
replies
846
views
Comment: Comment: ONT multiplexing not generating equal amount of data for each barcodes
21 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
994
views
Comment: Comment: Convert fasta to Fastq/bam
21 months ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
942
views
Comment: Comment: Variant calling for scaffold genome
24 months ago by samuel.a.odonnell ▴ 520
1
vote
1
reply
933
views
Comment: Comment: A question about SPAdes
24 months ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
1.0k
views
Comment: Comment: Method to fill N gaps with de novo assembly
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
626
views
Comment: Comment: comparing and aligning 2 de novo genomes
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
626
views
Comment: Comment: comparing and aligning 2 de novo genomes
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
1.1k
views
Comment: Comment: Incomplete TE identification by repeatmasker
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
1.1k
views
Comment: Comment: Incomplete TE identification by repeatmasker
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
1.1k
views
Comment: Comment: Incomplete TE identification by repeatmasker
2.0 years ago by samuel.a.odonnell ▴ 520
1
vote
0
replies
1.0k
views
Answer: Answer: "moving average" function for "coverage" signal in bed files?
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
608
views
Comment: Comment: Correct de novo assembly workflow and mapping
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
724
views
Comment: Comment: Considering two and more variation in polyploidy
2.0 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
724
views
Comment: Comment: Considering two and more variation in polyploidy
2.1 years ago by samuel.a.odonnell ▴ 520
2
votes
1
reply
981
views
Comment: Comment: Why he/she disabled the base calling in Guppy?
2.1 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
1.7k
views
Comment: Comment: Re-assembly assembled genomes
2.3 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
405
views
Detecting novel material inside repeat array
genome repeat alignment
2.6 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
1.1k
views
Comment: Comment: How are two alleles typically represented in a whole genome sequence?
2.6 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
600
views
Comment: Comment: Structural variation nomenclature ambiguity
2.6 years ago by samuel.a.odonnell ▴ 520
0
votes
0
replies
2.0k
views
Comment: Comment: Beginner problems: Aligning "genomes" that come in contigs
2.7 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
2.0k
views
Comment: Comment: Beginner problems: Aligning "genomes" that come in contigs
2.7 years ago by samuel.a.odonnell ▴ 520
1
vote
0
replies
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by samuel.a.odonnell ▴ 520
0
votes
1
reply
3.6k
views
Comment: Comment: large number of contigs after assembly
2.7 years ago by samuel.a.odonnell ▴ 520
110 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6