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Comment: Comment: how to decide the if the IDR result is good or not
14 months ago by dew ▴ 10
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665
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Comment: Comment: Is there any recommended RNAseq ranking for DEGs/driver genes
15 months ago by dew ▴ 10
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1.7k
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Comment: Comment: how to speed up snakemake workflow
16 months ago by dew ▴ 10
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1.7k
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Comment: Comment: how to speed up snakemake workflow
16 months ago by dew ▴ 10
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1.7k
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Comment: Comment: how to speed up snakemake workflow
16 months ago by dew ▴ 10
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728
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Comment: Comment: Are ther any bulk RNAseq pipeline recommend which including the downstream funct
16 months ago by dew ▴ 10
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728
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Comment: Comment: Are ther any bulk RNAseq pipeline recommend which including the downstream funct
16 months ago by dew ▴ 10
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531
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Comment: Comment: Driver genes and top 10/20/etc DEGs
16 months ago by dew ▴ 10
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477
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Comment: Comment: how to deal with strong sample heterogenous effects in RNAseq
17 months ago by dew ▴ 10
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592
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Comment: Comment: recommend tools for scRNAseq cell type annotation
17 months ago by dew ▴ 10
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1
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972
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Comment: Comment: possible reasons that very few significant DEGs from RNAseq
17 months ago by dew ▴ 10
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972
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Comment: Comment: possible reasons that very few significant DEGs from RNAseq
17 months ago by dew ▴ 10
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972
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Comment: Comment: possible reasons that very few significant DEGs from RNAseq
17 months ago by dew ▴ 10
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514
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Comment: Comment: how to decide the strandness of the RNAseq data
18 months ago by dew ▴ 10
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1
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914
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Comment: Comment: how much difference between raw counts value and the TPM value
20 months ago by dew ▴ 10
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948
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Comment: Comment: correlation among RNAseq and proteomics analysis
21 months ago by dew ▴ 10
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493
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Comment: Comment: differential expressed proteins cutoff threshold
21 months ago by dew ▴ 10
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891
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Comment: Comment: protein ID convert to gene name ID
22 months ago by dew ▴ 10
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891
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Comment: Comment: protein ID convert to gene name ID
22 months ago by dew ▴ 10
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Comment: Comment: Working with GTEX dataset
updated 17 months ago by 43k • written 23 months ago by ▴ 10
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968
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Comment: Comment: DESeq2 after GSVA "some values in assay are negative"
23 months ago by dew ▴ 10
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727
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Comment: Comment: featureCounts results has many psedugenes(ENSG***) together with genes
2.0 years ago by dew ▴ 10
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1
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727
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Comment: Comment: featureCounts results has many psedugenes(ENSG***) together with genes
2.0 years ago by dew ▴ 10
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915
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Comment: Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by dew ▴ 10
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1
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915
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Comment: Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by dew ▴ 10
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2
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915
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Comment: Comment: ncRNA mapping rate to the hg38.nc.fasta
2.0 years ago by dew ▴ 10
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1
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1.6k
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Comment: Comment: GSEA run with just RNK file
2.1 years ago by dew ▴ 10
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1.6k
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Comment: Comment: GSEA run with just RNK file
2.2 years ago by dew ▴ 10
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1.6k
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Comment: Comment: GSEA run with just RNK file
updated 2.2 years ago by 142k • written 2.2 years ago by ▴ 10
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615
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Comment: Comment: gene numbers after tximport summarizeToGene
2.3 years ago by dew ▴ 10
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3.6k
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Comment: Comment: Multiple VCF files and VEP
2.3 years ago by dew ▴ 10
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1
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2.7k
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Comment: Comment: How to subset the output of tximport in DE analysis using DEseq2
2.3 years ago by dew ▴ 10
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683
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Comment: C: trim scripts help
3.8 years ago by dew ▴ 10
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13k
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Comment: C: GSVA analysis in R: How to use my geneset and expression data matrix in GSVA.
5.5 years ago by dew ▴ 10
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