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Comment: Comment: circular RNA analysis workflow
7 months ago by Barry Digby ★ 1.1k
1
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1
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1.3k
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Comment: Comment: error while testing nextflow with --genome GRCh38
8 months ago by Barry Digby ★ 1.1k
0
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1
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4.0k
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Comment: Comment: TCGA transcriptome data to R (DESeq2)
10 months ago by Barry Digby ★ 1.1k
0
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0
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4.0k
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Comment: Comment: TCGA transcriptome data to R (DESeq2)
11 months ago by Barry Digby ★ 1.1k
0
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1
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4.0k
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Comment: Comment: TCGA transcriptome data to R (DESeq2)
11 months ago by Barry Digby ★ 1.1k
2
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0
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707
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Comment: Comment: how does annotate circular RNA ?
15 months ago by Barry Digby ★ 1.1k
1
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0
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2.0k
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Comment: Comment: Add NES value to GSEA plot
21 months ago by Barry Digby ★ 1.1k
1
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1
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1.3k
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Comment: Comment: TCGA library type information
22 months ago by Barry Digby ★ 1.1k
0
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1
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1.3k
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Comment: Comment: TCGA library type information
22 months ago by Barry Digby ★ 1.1k
3
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0
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1.1k
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Comment: C: Getting standard 12-column format for a list of genes
2.0 years ago by Barry Digby ★ 1.1k
0
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0
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552
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Comment: C: how to annotate Circular RNA gene type?
2.0 years ago by Barry Digby ★ 1.1k
1
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1
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552
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Comment: C: how to annotate Circular RNA gene type?
2.0 years ago by Barry Digby ★ 1.1k
0
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1
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2.0k
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Comment: C: nextflow set tuple issue
2.0 years ago by Barry Digby ★ 1.1k
1
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0
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6.5k
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Comment: C: How to plot GSEA result?
2.1 years ago by Barry Digby ★ 1.1k
0
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1
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2.0k
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Comment: C: Which adapters to use for trimming?
2.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.0k
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Comment: C: Which adapters to use for trimming?
2.2 years ago by Barry Digby ★ 1.1k
0
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1
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1.0k
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Comment: C: How to remove X & Y chromosome genes from RNAseq data
2.2 years ago by Barry Digby ★ 1.1k
1
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0
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6.5k
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Comment: C: How to plot GSEA result?
2.2 years ago by Barry Digby ★ 1.1k
0
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0
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1.4k
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Comment: C: TCGA gene and mirna expression value
2.2 years ago by Barry Digby ★ 1.1k
0
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0
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1.2k
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Comment: C: Why is mapper.pl from mirdeep2 producing an empty mapping file?
2.3 years ago by Barry Digby ★ 1.1k
1
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0
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2.2k
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Comment: C: How to select differential expressed genes using DeSeq2?
2.4 years ago by Barry Digby ★ 1.1k
0
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1
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2.2k
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Comment: C: How to select differential expressed genes using DeSeq2?
2.4 years ago by Barry Digby ★ 1.1k
0
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0
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1.6k
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Comment: C: STAR index file for GRCH37
2.5 years ago by Barry Digby ★ 1.1k
0
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1
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942
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Comment: C: DESeq2 analysis with high number of samples
2.5 years ago by Barry Digby ★ 1.1k
1
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0
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802
views
Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
2.5 years ago by Barry Digby ★ 1.1k
1
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1
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802
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Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
2.5 years ago by Barry Digby ★ 1.1k
0
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0
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4.0k
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Comment: C: Specify output dir when downloading snpEff database?
2.6 years ago by Barry Digby ★ 1.1k
1
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0
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5.9k
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Comment: C: How to prepare .gct file for GSEA software?
2.7 years ago by Barry Digby ★ 1.1k
1
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1
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1.9k
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Comment: C: How to deal with the abnormal samples from TCGA found in a PCA?
2.7 years ago by Barry Digby ★ 1.1k
0
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1
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5.3k
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Comment: C: Nextflow using existing Conda Environments
2.7 years ago by Barry Digby ★ 1.1k
0
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1
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5.3k
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Comment: C: Nextflow using existing Conda Environments
2.8 years ago by Barry Digby ★ 1.1k
0
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0
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1.4k
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Comment: C: miRDeep2 problem with reads_collapsed.fa
2.8 years ago by Barry Digby ★ 1.1k
0
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1
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1.4k
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Comment: C: miRDeep2 problem with reads_collapsed.fa
2.8 years ago by Barry Digby ★ 1.1k
1
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0
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5.3k
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Comment: C: Nextflow using existing Conda Environments
2.8 years ago by Barry Digby ★ 1.1k
0
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0
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9.2k
views
Comment: C: How to create a GSEA enrichment plot for the phenotypes in R?
2.8 years ago by Barry Digby ★ 1.1k
0
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0
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995
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Comment: C: Where is a good place to find experienced, ongoing, bioinformatics help?
2.9 years ago by Barry Digby ★ 1.1k
1
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1
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1.7k
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Comment: C: Massive L2FC in DESeq2
2.9 years ago by Barry Digby ★ 1.1k
0
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1
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2.5k
views
Comment: C: can I use some interesting genes(such as a subset of DEGs from RNA-seq result) t
3.0 years ago by Barry Digby ★ 1.1k
0
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0
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1.4k
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Comment: C: Editing tools script in a docker container
3.0 years ago by Barry Digby ★ 1.1k
0
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0
replies
898
views
Comment: C: How to perform iteration task inside a docker image (RNA-seq analysis)
3.1 years ago by Barry Digby ★ 1.1k
0
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0
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1.8k
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Comment: C: Missing gene symbols in bustools output
3.2 years ago by Barry Digby ★ 1.1k
0
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0
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1.8k
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Comment: C: Missing gene symbols in bustools output
3.2 years ago by Barry Digby ★ 1.1k
0
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0
replies
3.2k
views
Comment: C: How to analyze the RNAseq paired samples with DESeq2?
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.2k
views
Comment: C: (scRNA) bustools transcript to gene file
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.2k
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Comment: C: (scRNA) bustools transcript to gene file
3.2 years ago by Barry Digby ★ 1.1k
1
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1
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3.2k
views
Comment: C: How to analyze the RNAseq paired samples with DESeq2?
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.2k
views
Comment: C: (scRNA) bustools transcript to gene file
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.4k
views
Comment: C: Final process in Nextflow not using all files in channel
3.2 years ago by Barry Digby ★ 1.1k
0
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0
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1.3k
views
Comment: C: Could not locate bowtie index (miRDeep2 analysis)
3.3 years ago by Barry Digby ★ 1.1k
0
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1
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1.3k
views
Comment: C: Could not locate bowtie index (miRDeep2 analysis)
3.3 years ago by Barry Digby ★ 1.1k
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