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0
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2.6k
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Comment:
Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
10 months ago by
jordi.planells
▴ 480
0
votes
1
reply
2.6k
views
Comment:
Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
10 months ago by
jordi.planells
▴ 480
1
vote
1
reply
1.3k
views
Comment:
Comment: --normalizeUsing RPGC
11 months ago by
jordi.planells
▴ 480
0
votes
1
reply
1.3k
views
Comment:
Comment: --normalizeUsing RPGC
11 months ago by
jordi.planells
▴ 480
0
votes
0
replies
385
views
Deeptools clustering differs when clustering sample as standalone and together with other samples
deepTools
21 months ago by
jordi.planells
▴ 480
0
votes
0
replies
553
views
Understanding HiC compartimentalization data
HiC
3.1 years ago by
jordi.planells
▴ 480
0
votes
1
reply
2.3k
views
Comment:
Comment: Picard MarkDuplicates failing without error message
3.5 years ago by
jordi.planells
▴ 480
0
votes
2
replies
2.3k
views
Comment:
Comment: Picard MarkDuplicates failing without error message
3.5 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.0k
views
Comment:
Comment: How to achieve the goal "only genes with non-zero expression values in at least
3.6 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.3k
views
Comment:
Comment: how to create matrix from row data.
3.6 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.0k
views
Answer:
Answer: How to add GO annotation terms (molecular function, component, biological proces
3.6 years ago by
jordi.planells
▴ 480
0
votes
1
reply
2.3k
views
Comment:
C: Bowtie2: Mate file error & internal exception
3.8 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.3k
views
Comment:
C: Select and keep only some results from DESEq2
3.8 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.3k
views
Comment:
C: Select and keep only some results from DESEq2
3.8 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.2k
views
Comment:
C: Read count using htseq-count.
3.8 years ago by
jordi.planells
▴ 480
1
vote
0
replies
1.2k
views
Comment:
C: Read count using htseq-count.
3.8 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.5k
views
Comment:
C: Getting the fasta format of a list of genes
3.8 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.0k
views
Answer:
A: The parameter of HISAT2 and samtools
3.8 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.3k
views
Comment:
C: Change sample order in plotHeatmap?
3.8 years ago by
jordi.planells
▴ 480
1
vote
2
replies
1.3k
views
Comment:
C: Change sample order in plotHeatmap?
3.8 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.0k
views
Comment:
C: Calculating fold change...CONFUSION
3.8 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.7k
views
Answer:
A: Filtering of transcripts with more than two exons
3.8 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.3k
views
Comment:
C: DESeq2 for DEG in R
3.9 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.3k
views
Comment:
C: DESeq2 for DEG in R
3.9 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.4k
views
Comment:
C: Huge difference between P and adj P value
3.9 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.5k
views
Comment:
C: bigwigs to reads in peaks
3.9 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.5k
views
Comment:
C: bigwigs to reads in peaks
3.9 years ago by
jordi.planells
▴ 480
1
vote
0
replies
1.0k
views
Answer:
A: How to map reads onto human hg38 gene body regions instead of whole genome?
3.9 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.5k
views
Comment:
C: Interpretation of PCA plot
4.0 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.5k
views
Comment:
C: Interpretation of PCA plot
4.0 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.9k
views
Comment:
C: No coverage in macs2 peak summit!
4.0 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.1k
views
Comment:
C: Principle component analysis
4.0 years ago by
jordi.planells
▴ 480
0
votes
2
replies
1.1k
views
Comment:
C: Principle component ananlysis
4.0 years ago by
jordi.planells
▴ 480
0
votes
0
replies
933
views
Comment:
C: DESeq2 discrepancy between analysis.
4.0 years ago by
jordi.planells
▴ 480
0
votes
2
replies
933
views
DESeq2 discrepancy between analysis.
R
RNA-Seq
DESeq2
updated 4.0 years ago by
swbarnes2
14k • written 4.0 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.4k
views
Comment:
C: How to evaluate gene expression
4.0 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.4k
views
Comment:
C: How to evaluate gene expression
4.0 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.4k
views
Comment:
C: How to evaluate gene expression
4.0 years ago by
jordi.planells
▴ 480
1
vote
0
replies
1.4k
views
Answer:
A: Calculate library complexity for Chip sep data
4.0 years ago by
jordi.planells
▴ 480
1
vote
1
reply
10k
views
Comment:
C: Removing fastq duplicates
updated 4.0 years ago by
Ram
44k • written 4.0 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.0k
views
Comment:
C: how to get input file of closest-features a bed-format file
4.1 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.0k
views
Comment:
C: how to get input file of closest-features a bed-format file
4.1 years ago by
jordi.planells
▴ 480
0
votes
0
replies
584
views
Answer:
A: Find cooccurences of factors across multiple files
4.1 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.2k
views
Comment:
C: Knock out genes and TPM
4.1 years ago by
jordi.planells
▴ 480
2
votes
1
reply
1.2k
views
Comment:
C: Knock out genes and TPM
4.1 years ago by
jordi.planells
▴ 480
1
vote
1
reply
1.2k
views
Comment:
C: Knock out genes and TPM
4.1 years ago by
jordi.planells
▴ 480
2
votes
0
replies
1.1k
views
Answer:
A: How to extract upstream and downstream of lncRNA in particular range?
4.1 years ago by
jordi.planells
▴ 480
0
votes
1
reply
1.0k
views
Comment:
A: how to get input file of closest-features a bed-format file
4.1 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.5k
views
Answer:
A: Pilon software installation
4.1 years ago by
jordi.planells
▴ 480
0
votes
0
replies
1.5k
views
Answer:
A: intersect two file
4.1 years ago by
jordi.planells
▴ 480
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