Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
815
views
bcftools unable to tag poor variant calls properly
bcftools gatk vafator
updated 2.4 years ago by 45k • written 2.7 years ago by ▴ 940
0
votes
1
reply
4.3k
views
Comment: Comment: Where is the documentation for PacBio tool bam2fastx?
2.7 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
2.5k
views
Comment: Comment: Tool to combine Germline Variant call from different variant callers
2.7 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
11k
views
Comment: Comment: Picard Exception: Illegal Mate State
2.7 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
2.5k
views
Comment: Comment: Tool to combine Germline Variant call from different variant callers
2.7 years ago by rohitsatyam102 ▴ 940
0
votes
3
replies
2.5k
views
Tool to combine Germline Variant call from different variant callers
haplotypecaller gatk snps
2.7 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
17k
views
Comment: Comment: How to filter/view reads mapped to multiple locations using samtools or pysam
2.8 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
635
views
Queries regarding SARS-CoV2 GISAID Genomes Submission
wf-artic COVID GISAID
3.0 years ago by rohitsatyam102 ▴ 940
1
vote
0
replies
2.8k
views
Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
2.8k
views
Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
3.0 years ago by rohitsatyam102 ▴ 940
6
votes
5
replies
2.8k
views
how to pass trimmed fastP output to bwa in Nextflow
fastp bwa nextflow
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
2.8k
views
Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
3.4k
views
Comment: Comment: bcl2fastq dumps most of the reads as undetermined
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
3.4k
views
Comment: Comment: bcl2fastq dumps most of the reads as undetermined
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
4
replies
2.4k
views
convert a list of plotly plots to an HTML output
ggplot2 bam plotly coverage
updated 3.0 years ago by 15k • written 3.0 years ago by ▴ 940
5
votes
4
replies
3.4k
views
bcl2fastq dumps most of the reads as undetermined
bcl2fastq
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
2.4k
views
Comment: Comment: convert a list of plotly plots to an HTML output
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
5.0k
views
Comment: Comment: reduce space between X-axis ticks
3.0 years ago by rohitsatyam102 ▴ 940
2
votes
6
replies
5.0k
views
reduce space between X-axis ticks
R GSEA
3.0 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
5.0k
views
Comment: Comment: reduce space between X-axis ticks
3.1 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
5.0k
views
Comment: Comment: reduce space between X-axis ticks
3.1 years ago by rohitsatyam102 ▴ 940
1
vote
0
replies
1.5k
views
Tutorial: Making LDA Score plot
LDA metagenomics
3.1 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
24k
views
Comment: Comment: RNA-Seq analysis using STAR and Salmon
3.1 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
577
views
Make parts of process run once and other parts as loop
nextflow sars nextclade covid
3.2 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
1.5k
views
Comment: Comment: Nextflow printing help message even when params.help is false
3.2 years ago by rohitsatyam102 ▴ 940
6
votes
2
replies
1.5k
views
Nextflow printing help message even when params.help is false
nextflow align bwa alignment
3.2 years ago by rohitsatyam102 ▴ 940
0
votes
6
replies
2.4k
views
Nextflow runs Successfully but output files are empty. How to debug?
nextflow bcftools
3.2 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
2.4k
views
Answer: Answer: Nextflow runs Successfully but output files are empty. How to debug?
3.2 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
2.4k
views
Comment: Comment: Nextflow runs Successfully but output files are empty. How to debug?
3.2 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
2.4k
views
Comment: Comment: Nextflow runs Successfully but output files are empty. How to debug?
3.2 years ago by rohitsatyam102 ▴ 940
1
vote
1
reply
3.4k
views
Comment: Comment: Fastqc in nextflow run only one pair of fastq.gz file and not on all Fastq files
3.3 years ago by rohitsatyam102 ▴ 940
3
votes
3
replies
3.4k
views
Fastqc in nextflow run only one pair of fastq.gz file and not on all Fastq files
nextflow fastqc
updated 3.3 years ago by 89k • written 3.3 years ago by ▴ 940
0
votes
0
replies
3.1k
views
Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
3.3 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
3.1k
views
Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
3.3 years ago by rohitsatyam102 ▴ 940
3
votes
5
replies
3.1k
views
Using shell command in Nextflow DSL=2 for BWA mem aligner
nextflow alihnment align bwa
3.3 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
3.1k
views
Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
3.3 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
1.5k
views
Comment: Comment: Online training - Introduction to Nextflow
3.3 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
5.0k
views
Comment: Comment: Tutorial for analysing gpr files of microarray
3.3 years ago by rohitsatyam102 ▴ 940
3
votes
1
reply
996
views
GO Term Analysis in scRNASeq data with low number of genes expressed
scrnaseq Seurat
updated 3.3 years ago by ★ 2.0k • written 3.3 years ago by ▴ 940
0
votes
0
replies
4.0k
views
Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
3.4 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
4.0k
views
Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
3.4 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
2.4k
views
Comment: Comment: How to use SingleR for annotating single-cell transcriptomics dataset with our o
3.6 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
4.2k
views
Comment: Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
3.6 years ago by rohitsatyam102 ▴ 940
5
votes
0
replies
4.0k
views
Forum: Correct method of Merging/Integrating multiple single cell dataset using Seurat
seurat scrnaseq
3.6 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
11k
views
Comment: Comment: SCTransform prior or after merging samples into one object?
3.6 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
17k
views
Comment: Comment: FindAllMarkers pct1 and pct2
3.6 years ago by rohitsatyam102 ▴ 940
0
votes
1
reply
17k
views
Comment: Comment: FindAllMarkers pct1 and pct2
3.6 years ago by rohitsatyam102 ▴ 940
0
votes
0
replies
4.4k
views
Comment: Comment: Running fastq_screen on your data
3.6 years ago by rohitsatyam102 ▴ 940
4
votes
2
replies
4.4k
views
Tutorial: Running fastq_screen on your data
fastqscreen
3.6 years ago by rohitsatyam102 ▴ 940
1
vote
0
replies
1.3k
views
Interpreting the Jackstraw plot of Seurat
genomics seurat plot scrnaseq
3.7 years ago by rohitsatyam102 ▴ 940
238 results • Page 2 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6