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Has anyone tried "star --readFilesManifest manifest.tsv" and then "featureCounts --byReadGroup" to quickly get gene quantification for multiple sampl…
RNA-Seq STAR featureCounts
3.2 years ago by Xianjun ▴ 310
5
votes
10
replies
4.4k
views
How to generate random genomic sequences that are GC- and length-matched to my input sequences?
sequence GC random background
updated 3.8 years ago by ▴ 30 • written 6.1 years ago by ▴ 310
6
votes
5
replies
5.8k
views
Why Does Cufflinks With Mask (-M) Option Have Lower Fpkm For Mrna Genes?
cufflinks
updated 8.4 years ago by ▴ 170 • written 10.5 years ago by ▴ 310
9
votes
3
replies
10k
views
How to correctly use the color option in R image() function?
R image
updated 14 months ago by 43k • written 9.0 years ago by ▴ 310
3
votes
0
replies
4.1k
views
Are the rlog or VST values from DESeq2 comparable across genes?
DESeq2
updated 23 months ago by 43k • written 9.1 years ago by ▴ 310
0
votes
4
replies
3.9k
views
cufflinks output file isoforms.fpkm_tracking has mixed ENSGxxx and ENSTxxx ID in the tracking_id column
Cufflinks isoforms.fpkm_tracking RNA-Seq
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 310
27
votes
8
replies
11k
views
7 follow
Any Quick Sort Method For Large Bed File As 20G In Size?
sort bed
updated 3 months ago by ▴ 530 • written 11.1 years ago by ▴ 310
7 results • Page 1 of 1
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