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Answer: Answer: NGS data analysis
2.7 years ago by noodle ▴ 650
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1.5k
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Answer: Answer: Classifying shotgun metagenomes with 16S rRNA database.
2.7 years ago by noodle ▴ 650
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1
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1.9k
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Comment: Comment: How to check for Over or Under-marking Duplicates in BAM files
2.7 years ago by noodle ▴ 650
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1
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2.1k
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Answer: Answer: Some questions on RAD paired-end sequencing
2.7 years ago by noodle ▴ 650
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1.8k
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Comment: Comment: information about genes from different databases and patents
2.7 years ago by noodle ▴ 650
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1
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1.8k
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Comment: Comment: information about genes from different databases and patents
2.7 years ago by noodle ▴ 650
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2
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1.8k
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Answer: Answer: information about genes from different databases and patents
2.7 years ago by noodle ▴ 650
0
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0
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506
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Table summary for SNP linkages from same read
NGS SNP RNAseq
2.7 years ago by noodle ▴ 650
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1
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2.5k
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Answer: Answer: Is removing rRNAs, tRNAs, etc really a necessary step in the miRNA analysis?
2.7 years ago by noodle ▴ 650
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0
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5.9k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
2.7 years ago by noodle ▴ 650
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0
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5.9k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
2.7 years ago by noodle ▴ 650
1
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1
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5.9k
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Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
2.7 years ago by noodle ▴ 650
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1
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1.1k
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Comment: Comment: create 'negative' bed annotation from bed
2.8 years ago by noodle ▴ 650
4
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3
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1.1k
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create 'negative' bed annotation from bed
bed gtf gff
updated 2.8 years ago by 45k • written 2.8 years ago by ▴ 650
0
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0
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2.0k
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Comment: Comment: Compare two RNA-Seq log2fc tables
2.8 years ago by noodle ▴ 650
2
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1
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2.0k
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Answer: Answer: Compare two RNA-Seq log2fc tables
2.8 years ago by noodle ▴ 650
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0
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3.9k
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Comment: Comment: Laptop specs for MiniON
2.9 years ago by noodle ▴ 650
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1
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3.9k
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Comment: Comment: Laptop specs for MiniON
2.9 years ago by noodle ▴ 650
3
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1
reply
786
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LSF bsub SSUSP job stdout
IBM LSF bsub
2.9 years ago by noodle ▴ 650
1
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0
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786
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Answer: Answer: LSF bsub SSUSP job stdout
2.9 years ago by noodle ▴ 650
0
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1
reply
1.6k
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Comment: Comment: Explanation of BAM compression levels
2.9 years ago by noodle ▴ 650
5
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3
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1.6k
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Explanation of BAM compression levels
compression BAM
updated 2.9 years ago by 5.1k • written 2.9 years ago by ▴ 650
2
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3
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1.3k
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picard CollectRnaSeqMetrics gene coverage
picard gatk CollectRnaSeqMetrics
3.0 years ago by noodle ▴ 650
2
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0
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1.3k
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Answer: Answer: picard CollectRnaSeqMetrics gene coverage
3.0 years ago by noodle ▴ 650
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0
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1.3k
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Comment: Comment: picard CollectRnaSeqMetrics gene coverage
3.0 years ago by noodle ▴ 650
0
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0
replies
548
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RSamtools get picard tags
RSamtools samtools R RStudio
updated 2.2 years ago by 45k • written 3.0 years ago by ▴ 650
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0
replies
587
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16S (18S) rRNA primer design
taxonomy primer design mopo16s
3.4 years ago by noodle ▴ 650
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0
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665
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RSEM gff 'parent' field
RNAseq transcriptomics RSEM
3.8 years ago by noodle ▴ 650
0
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0
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3.5k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.9 years ago by noodle ▴ 650
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1
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3.5k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.9 years ago by noodle ▴ 650
0
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2
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3.5k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.9 years ago by noodle ▴ 650
0
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1
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3.5k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.9 years ago by noodle ▴ 650
0
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0
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3.5k
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Comment: Comment: Convert transcriptomic bam to genomic bam
3.9 years ago by noodle ▴ 650
2
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11
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3.5k
views
Convert transcriptomic bam to genomic bam
genome bisulfite bam transcriptome
3.9 years ago by noodle ▴ 650
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0
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1.6k
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Comment: Comment: AlphaFold on AWS metrics
4.0 years ago by noodle ▴ 650
0
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2
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1.6k
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AlphaFold on AWS metrics
AlphaFold AWS
4.0 years ago by noodle ▴ 650
0
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0
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747
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STAR bisulfite mapping
STAR bisulfite RNAseq
4.0 years ago by noodle ▴ 650
0
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0
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741
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Additional nanopore barcodes for RNA long reads
RNAseq NGS nanopore
4.0 years ago by noodle ▴ 650
4
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3
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1.7k
views
UCSC MySQL access
UCSC MySQL
updated 4.0 years ago by ▴ 670 • written 4.7 years ago by ▴ 650
0
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0
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8.0k
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Answer: Answer: Extracting exons and transcripts from gff3/gtf
4.0 years ago by noodle ▴ 650
0
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0
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4.0k
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Answer: Answer: Segmentation fault (core dumped) error when running MUSCLE
4.0 years ago by noodle ▴ 650
1
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0
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2.3k
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Answer: Answer: RNAseq data mapping mostly to intergenic regions
4.0 years ago by noodle ▴ 650
0
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0
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1.6k
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Comment: Comment: convert genomic bigWig file to transcriptome space
4.0 years ago by noodle ▴ 650
0
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1
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1.6k
views
Comment: Comment: convert genomic bigWig file to transcriptome space
4.0 years ago by noodle ▴ 650
2
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4
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1.6k
views
convert genomic bigWig file to transcriptome space
bigWig bw
4.0 years ago by noodle ▴ 650
0
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0
replies
608
views
Lifemap (phylogeny plot) custom display
taxonmy phylogeny lifemap
4.1 years ago by noodle ▴ 650
0
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0
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1.7k
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Comment: Comment: Pipeline version control system, pipeline storage
4.1 years ago by noodle ▴ 650
0
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0
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11k
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Comment: Comment: T2T-CHM13 "complete" human genome gff/gtf annotation file
4.1 years ago by noodle ▴ 650
0
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0
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641
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IGV add contig/chr to genome file within session
genome IGV bam alignment
4.2 years ago by noodle ▴ 650
0
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0
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2.4k
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Answer: Answer: igvtools not running, issue with java
4.2 years ago by noodle ▴ 650
207 results • Page 3 of 5
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