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17
votes
9
replies
5.0k
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6 follow
T2T-CHM13 "complete" human genome gff/gtf annotation file
genomics
updated 7 weeks ago by 130k • written 2.0 years ago by ▴ 380
0
votes
0
replies
309
views
Comment: Comment: pileup consolidation tool
4 months ago by joe ▴ 380
0
votes
0
replies
309
views
Comment: Comment: pileup consolidation tool
4 months ago by joe ▴ 380
0
votes
3
replies
309
views
pileup consolidation tool
RNAseq pileup jacusa samtools
4 months ago by joe ▴ 380
3
votes
0
replies
519
views
Answer: Answer: samtools markdup in Rsamtools
4 months ago by joe ▴ 380
0
votes
0
replies
301
views
Answer: Answer: NGS data analysis
4 months ago by joe ▴ 380
0
votes
0
replies
431
views
Answer: Answer: Classifying shotgun metagenomes with 16S rRNA database.
4 months ago by joe ▴ 380
0
votes
1
reply
547
views
Comment: Comment: How to check for Over or Under-marking Duplicates in BAM files
4 months ago by joe ▴ 380
0
votes
1
reply
454
views
Answer: Answer: Some questions on RAD paired-end sequencing
4 months ago by joe ▴ 380
0
votes
0
replies
722
views
Comment: Comment: information about genes from different databases and patents
4 months ago by joe ▴ 380
1
vote
1
reply
722
views
Comment: Comment: information about genes from different databases and patents
4 months ago by joe ▴ 380
1
vote
2
replies
722
views
Answer: Answer: information about genes from different databases and patents
4 months ago by joe ▴ 380
0
votes
0
replies
217
views
Table summary for SNP linkages from same read
NGS SNP RNAseq
4 months ago by joe ▴ 380
1
vote
1
reply
1.3k
views
Answer: Answer: Is removing rRNAs, tRNAs, etc really a necessary step in the miRNA analysis?
5 months ago by joe ▴ 380
0
votes
0
replies
1.4k
views
Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
5 months ago by joe ▴ 380
1
vote
0
replies
1.4k
views
Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
5 months ago by joe ▴ 380
1
vote
1
reply
1.4k
views
Comment: Comment: samtools sort operation very slow, bottle-neck is external hard drive?
5 months ago by joe ▴ 380
0
votes
1
reply
454
views
Comment: Comment: create 'negative' bed annotation from bed
6 months ago by joe ▴ 380
4
votes
3
replies
454
views
create 'negative' bed annotation from bed
bed gtf gff
updated 6 months ago by 39k • written 6 months ago by ▴ 380
0
votes
0
replies
867
views
Comment: Comment: Compare two RNA-Seq log2fc tables
6 months ago by joe ▴ 380
2
votes
1
reply
867
views
Answer: Answer: Compare two RNA-Seq log2fc tables
6 months ago by joe ▴ 380
0
votes
0
replies
1.3k
views
Comment: Comment: Laptop specs for MiniON
7 months ago by joe ▴ 380
0
votes
1
reply
1.3k
views
Comment: Comment: Laptop specs for MiniON
7 months ago by joe ▴ 380
3
votes
1
reply
301
views
LSF bsub SSUSP job stdout
IBM LSF bsub
7 months ago by joe ▴ 380
1
vote
0
replies
301
views
Answer: Answer: LSF bsub SSUSP job stdout
7 months ago by joe ▴ 380
0
votes
1
reply
430
views
Comment: Comment: Explanation of BAM compression levels
7 months ago by joe ▴ 380
5
votes
3
replies
430
views
Explanation of BAM compression levels
compression BAM
updated 7 months ago by 2.7k • written 7 months ago by ▴ 380
2
votes
3
replies
481
views
picard CollectRnaSeqMetrics gene coverage
picard gatk CollectRnaSeqMetrics
8 months ago by joe ▴ 380
2
votes
0
replies
481
views
Answer: Answer: picard CollectRnaSeqMetrics gene coverage
8 months ago by joe ▴ 380
0
votes
0
replies
481
views
Comment: Comment: picard CollectRnaSeqMetrics gene coverage
8 months ago by joe ▴ 380
0
votes
0
replies
195
views
RSamtools get picard tags
R RSamtools RStudio samtools
9 months ago by joe ▴ 380
0
votes
0
replies
229
views
16S (18S) rRNA primer design
taxonomy primer design mopo16s
13 months ago by joe ▴ 380
0
votes
0
replies
300
views
RSEM gff 'parent' field
RNAseq transcriptomics RSEM
19 months ago by joe ▴ 380
0
votes
0
replies
1.8k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
19 months ago by joe ▴ 380
0
votes
1
reply
1.8k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
19 months ago by joe ▴ 380
0
votes
2
replies
1.8k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
19 months ago by joe ▴ 380
0
votes
1
reply
1.8k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
19 months ago by joe ▴ 380
0
votes
0
replies
1.8k
views
Comment: Comment: Convert transcriptomic bam to genomic bam
19 months ago by joe ▴ 380
2
votes
11
replies
1.8k
views
Convert transcriptomic bam to genomic bam
genome bisulfite bam transcriptome
19 months ago by joe ▴ 380
0
votes
0
replies
956
views
Comment: Comment: AlphaFold on AWS metrics
20 months ago by joe ▴ 380
0
votes
2
replies
956
views
AlphaFold on AWS metrics
AlphaFold AWS
20 months ago by joe ▴ 380
0
votes
0
replies
346
views
STAR bisulfite mapping
STAR bisulfite RNAseq
20 months ago by joe ▴ 380
0
votes
0
replies
391
views
Additional nanopore barcodes for RNA long reads
RNAseq NGS nanopore
20 months ago by joe ▴ 380
3
votes
3
replies
909
views
UCSC MySQL access
UCSC MySQL
updated 21 months ago by ▴ 620 • written 2.5 years ago by ▴ 380
0
votes
0
replies
4.1k
views
Answer: Answer: Extracting exons and transcripts from gff3/gtf
21 months ago by joe ▴ 380
0
votes
0
replies
2.1k
views
Answer: Answer: Segmentation fault (core dumped) error when running MUSCLE
21 months ago by joe ▴ 380
1
vote
0
replies
973
views
Answer: Answer: RNAseq data mapping mostly to intergenic regions
21 months ago by joe ▴ 380
0
votes
0
replies
827
views
Comment: Comment: convert genomic bigWig file to transcriptome space
21 months ago by joe ▴ 380
0
votes
1
reply
827
views
Comment: Comment: convert genomic bigWig file to transcriptome space
21 months ago by joe ▴ 380
2
votes
4
replies
827
views
convert genomic bigWig file to transcriptome space
bigWig bw
21 months ago by joe ▴ 380
112 results • Page 1 of 3
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