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2
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0
replies
1.1k
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Answer:
Answer: Error on R shiny app metaOmics; object %AND% not found
23 months ago by
fracarb8
★ 1.6k
1
vote
1
reply
1.1k
views
Comment:
Comment: Error on R shiny app metaOmics; object %AND% not found
24 months ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.7k
views
Answer:
Answer: Automatic rename of filenames with bash script
24 months ago by
fracarb8
★ 1.6k
1
vote
0
replies
2.0k
views
Comment:
Comment: Normalization of RNASeq counts with a reference gene (/genes)
2.0 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
538
views
Comment:
Comment: Content of Rscript gone after updating
2.0 years ago by
fracarb8
★ 1.6k
1
vote
1
reply
2.0k
views
Answer:
Answer: Normalization of RNASeq counts with a reference gene (/genes)
2.0 years ago by
fracarb8
★ 1.6k
3
votes
1
reply
960
views
Answer:
Answer: use gene symbol in heatmap instead of ensemble geneID
2.0 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
982
views
Answer:
Answer: How to test for gender bias in RNA seq experiment ?
2.1 years ago by
fracarb8
★ 1.6k
2
votes
0
replies
502
views
Comment:
Comment: What does it mean by "conformational space"?
2.1 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
896
views
Answer:
Answer: When looking at a heatmap created by DESeq2, how can I find what genes are in sp
2.1 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
2.0k
views
Answer:
Answer: MAST for scRNA-seq
2.1 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
2.1k
views
Comment:
Comment: Seurat cluster label transfer
2.2 years ago by
fracarb8
★ 1.6k
1
vote
1
reply
3.2k
views
Comment:
Comment: addModuleScore and enrichment score methods
2.2 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
2.0k
views
Comment:
Comment: highlight subset of cells on tSNE plot
2.2 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
814
views
Comment:
Comment: RNA-Sequencing on RStudio vs batch scripts on Terminal
2.2 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
521
views
Answer:
Answer: How to get DEG considering "clusters" and "samples" at the same time
2.2 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
1.7k
views
Comment:
Comment: Reanalyzing data after Seurat subset
2.2 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
3.3k
views
Comment:
Comment: Seurat Dotplot _ How can I have different panels on my doplot?
2.2 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.9k
views
Answer:
Answer: Is there a tool for plotting protein structures and domains?
2.3 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
376
views
Data Preparation for single-cell Machine Learning classification (svm + RF)
seurat
machine-learning
scRNA-Seq
2.3 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
1.2k
views
Comment:
Comment: How can I add the information at the end of the line to the beginning of the lin
2.3 years ago by
fracarb8
★ 1.6k
2
votes
1
reply
1.2k
views
Answer:
Answer: How can I add the information at the end of the line to the beginning of the lin
2.3 years ago by
fracarb8
★ 1.6k
2
votes
0
replies
1.3k
views
Answer:
Answer: Enrichment plot in R with custom pathways
2.3 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.0k
views
Answer:
Answer: scRNA and stemness score
2.3 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
3.2k
views
Answer:
Answer: Spatial transcriptomics without the h5 file
2.3 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
660
views
Answer:
Answer: Which method works best for analysing ONE sample of scRNA-seq data?
2.3 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.9k
views
Answer:
Answer: Sub clustering from Seurat Object
2.3 years ago by
fracarb8
★ 1.6k
2
votes
1
reply
3.4k
views
Answer:
Answer: How can I colour UMAP by sample batches
2.3 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
679
views
Comment:
Comment: How to determine which gene contribute the most to a specific trait.
2.4 years ago by
fracarb8
★ 1.6k
2
votes
0
replies
1.5k
views
Comment:
Comment: Forcing Seurat to include certain genes during integration
2.4 years ago by
fracarb8
★ 1.6k
4
votes
2
replies
1.5k
views
Answer:
Answer: Forcing Seurat to include certain genes during integration
2.4 years ago by
fracarb8
★ 1.6k
1
vote
1
reply
1.3k
views
Comment:
Comment: Comparison between structure of two protein PDB files
2.4 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
7.5k
views
Comment:
Comment: conversion of ensembl to gene_symbol in seurat
2.4 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
1.8k
views
Comment:
Comment: Help with R code to get a unique list
2.4 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
8.8k
views
Comment:
Comment: seurat, subcluster and trajectory analysis (Monocle 3)
2.4 years ago by
fracarb8
★ 1.6k
1
vote
1
reply
8.8k
views
Answer:
Answer: seurat, subcluster and trajectory analysis (Monocle 3)
2.5 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
6.1k
views
Answer:
Answer: What is a count matrix for input into Seurat supposed to look like?
2.5 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
936
views
Answer:
Answer: Estimate cell types proportion by single cell expressions data and gene markers
2.5 years ago by
fracarb8
★ 1.6k
1
vote
1
reply
1.8k
views
Comment:
Comment: Keep rows with columns having values between -1 and 1 from a dataframe in R
2.5 years ago by
fracarb8
★ 1.6k
3
votes
1
reply
5.7k
views
Answer:
Answer: Extract ENSEMBL IDs from processed Seurat object instead of gene symbols
2.5 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.5k
views
Answer:
Answer: just trying to launching my DE-seq2 by csv but isn't work...
2.5 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
3.3k
views
Comment:
Comment: Grouping datasets in Seurat
2.5 years ago by
fracarb8
★ 1.6k
6
votes
3
replies
3.3k
views
Answer:
Answer: Grouping datasets in Seurat
2.5 years ago by
fracarb8
★ 1.6k
1
vote
0
replies
1.1k
views
Answer:
Answer: How to know if certain gene is highly expressed compared to some common housekee
2.5 years ago by
fracarb8
★ 1.6k
3
votes
1
reply
4.8k
views
Answer:
Answer: Seurat-Merging and integrate
2.5 years ago by
fracarb8
★ 1.6k
0
votes
1
reply
1.1k
views
Comment:
Comment: monocle3 and spData
2.5 years ago by
fracarb8
★ 1.6k
3
votes
0
replies
9.5k
views
Comment:
Comment: Differential gene expression analysis in Python
2.6 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
1.5k
views
Answer:
Answer: TCGAbiolinks: which normalization before differential expression analysis (legac
2.7 years ago by
fracarb8
★ 1.6k
2
votes
1
reply
4.8k
views
Answer:
Answer: Seurat re-clustering a cell subset but cell identity numbers are not completely
2.7 years ago by
fracarb8
★ 1.6k
0
votes
0
replies
930
views
Comment:
Comment: Center or fix a sample at 0 on PC1 in PCA plot
2.8 years ago by
fracarb8
★ 1.6k
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