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questions
0
votes
2
replies
223
views
How to update R on ubuntu
installation
update
R
apt-get
4 days ago by
Bosberg
▴ 50
0
votes
4
replies
492
views
How to find SNP locations in assemblies other than hg38
hg19
SNP
dbsnp
updated 12 weeks ago by
Ram
43k • written 3 months ago by
Bosberg
▴ 50
2
votes
5
replies
551
views
How to find genomic locations of SNP probes in EPIC chips
microarray
snp
epic
3 months ago by
Bosberg
▴ 50
0
votes
0
replies
381
views
How to set (or change) values in minfi::‘RGChannelSet’ object
minfi
RGChannelSet
10 months ago by
Bosberg
▴ 50
0
votes
0
replies
364
views
How to annotate DMVs in methylation data (via RHmm) ?
DMV
RHmm
annotation
methylation
2.2 years ago by
Bosberg
▴ 50
2
votes
3
replies
2.2k
views
How to infer the TSS from a gtf file
gtf
regions
TSS
gene
body
updated 2.4 years ago by
Alex Reynolds
35k • written 2.4 years ago by
Bosberg
▴ 50
5
votes
7
replies
2.4k
views
How to prevent reduce from being performed in GRanges during setdiff
blunt-end
genomicranges
setdiff
updated 11 months ago by
hossiny
• 0 • written 3.2 years ago by
Bosberg
▴ 50
0
votes
2
replies
2.5k
views
How to download UCSC bed files for exons/introns/etc
reference
annotation
updated 13 months ago by
Ram
43k • written 2.6 years ago by
Bosberg
▴ 50
3
votes
2
replies
1.5k
views
Pyranges: obtaining sets of overlaps or overlap pairs
pyranges
overlaps
overlap pairs
List overlaps
updated 3.2 years ago by
Alex Reynolds
35k • written 3.2 years ago by
Bosberg
▴ 50
3
votes
3
replies
1.7k
views
Pyranges: operate on just metadata columns
pyranges
pandas
column selection
3.2 years ago by
Bosberg
▴ 50
1
vote
8
replies
2.2k
views
How are ambiguity characters handled in BWAmem?
sequence
alignment
genome
3.6 years ago by
Bosberg
▴ 50
3
votes
1
reply
693
views
Do fasta files have _any_ newline dependence?
sequence
updated 4.9 years ago by
Pierre Lindenbaum
161k • written 4.9 years ago by
Bosberg
▴ 50
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