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Warning in 1st line in SnpEff files
snpsift variants snpeff
9 months ago by Rozita ▴ 40
4
votes
3
replies
603
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Identifying enhancers that regulate certain genes
enhancers
updated 9 months ago by ▴ 900 • written 9 months ago by ▴ 40
0
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0
replies
326
views
Mutect2 error - Cannot construct fragment from more than two reads
variant-calling mutect2 wgs
updated 10 months ago by 43k • written 10 months ago by ▴ 40
0
votes
2
replies
873
views
Identify if variants are somatic or germline from VCF file
VCF somatic-variants
updated 10 months ago by 43k • written 10 months ago by ▴ 40
4
votes
4
replies
1.5k
views
Allele Frequency >0.5 for cancer somatic mutations?
somatic-mutations cancer VCF allele-frequency
updated 12 months ago by ★ 1.4k • written 12 months ago by ▴ 40
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1.1k
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vcf2maf --ref-fasta is missing or empty
vcf2maf
22 months ago by Rozita ▴ 40
0
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2
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1.0k
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Variant annotation help - predictCoding error message
VCF RStudio annotation variant proteinCoding
23 months ago by Rozita ▴ 40
0
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0
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558
views
Using AO and RO values instead of AD in VCF files
AO GATK RO VCF AD
23 months ago by Rozita ▴ 40
0
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3
replies
797
views
Error with SnpEff on Galaxy
snpeff galaxy variant_annotation
2.2 years ago by Rozita ▴ 40
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