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1
vote
5
replies
967
views
How to visualize skipped exon?
next-gen alternative splicing
updated 3.7 years ago by 142k • written 3.7 years ago by ▴ 70
0
votes
1
reply
967
views
Comment: C: How to visualize skipped exon?
3.7 years ago by tanya_fiskur ▴ 70
2
votes
7
replies
1.5k
views
Salmon or Kallisto without reference transcriptome - possible?
next-gen
updated 3.8 years ago by 14k • written 3.8 years ago by ▴ 70
0
votes
1
reply
1.1k
views
Comment: C: Is it possible to remove unwanted tissue contamination in transcriptome analysis
3.8 years ago by tanya_fiskur ▴ 70
0
votes
4
replies
1.1k
views
Is it possible to remove unwanted tissue contamination in transcriptome analysis?
next-gen RNA
3.8 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
885
views
Comment: C: Is it possible to pool the paired-end data?
3.9 years ago by tanya_fiskur ▴ 70
1
vote
4
replies
885
views
Is it possible to pool the paired-end data?
RNA-Seq
3.9 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.3k
views
Comment: C: How to adjust FDR in plotMD?
3.9 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.3k
views
Comment: C: How to adjust FDR in plotMD?
3.9 years ago by tanya_fiskur ▴ 70
1
vote
5
replies
1.3k
views
How to adjust FDR in plotMD?
RNA-Seq
updated 4.0 years ago by 87k • written 4.0 years ago by ▴ 70
4
votes
9
replies
5.8k
views
"Enhanced Volcano" package - how to set p adjusted cut off?
R Differential expression
updated 4.0 years ago by 87k • written 4.0 years ago by ▴ 70
0
votes
1
reply
5.8k
views
Comment: C: "Enhanced Volcano" package - how to set p adjusted cut off?
4.0 years ago by tanya_fiskur ▴ 70
1
vote
1
reply
1.3k
views
How to add dots to the PCA (in addition to labels)?
RNA-Seq edger
updated 4.0 years ago by 87k • written 4.0 years ago by ▴ 70
2
votes
3
replies
4.0k
views
FeatureCounts results: does it look correct? Why so many unassigned unmapped reads?
RNA-Seq featureCounts RNA STAR
updated 4.0 years ago by • 0 • written 4.0 years ago by ▴ 70
0
votes
1
reply
692
views
Comment: C: Not removing biological contaminants from transcriptome - consequences?
4.0 years ago by tanya_fiskur ▴ 70
0
votes
0
replies
1.9k
views
Comment: C: demultiplex PacBio fastq file
4.0 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
692
views
Comment: C: Not removing biological contaminants from transcriptome - consequences?
4.0 years ago by tanya_fiskur ▴ 70
1
vote
5
replies
692
views
Not removing biological contaminants from transcriptome - consequences?
next-gen
4.0 years ago by tanya_fiskur ▴ 70
0
votes
2
replies
845
views
Mapped more transcripts than there were in fastq file - HOW?
minimap2 RNA-Seq
updated 4.0 years ago by ▴ 160 • written 4.0 years ago by ▴ 70
1
vote
0
replies
5.8k
views
Comment: C: "Export" package in R - do analogues exist?
4.0 years ago by tanya_fiskur ▴ 70
0
votes
2
replies
2.8k
views
Comment: C: Raw counts after mapping to a reference transcriptome - possible?
4.0 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.7k
views
Comment: C: Strangely looking pheatmap after DEseq2
4.0 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.7k
views
Comment: C: Strangely looking pheatmap after DEseq2
4.0 years ago by tanya_fiskur ▴ 70
1
vote
5
replies
1.7k
views
Strangely looking pheatmap after DEseq2
pheatmap deseq2 RNA-Seq
updated 4.0 years ago by 87k • written 4.0 years ago by ▴ 70
0
votes
0
replies
4.0k
views
Comment: C: FeatureCounts results: does it look correct? Why so many unassigned unmapped rea
4.0 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
2.8k
views
Comment: C: Raw counts after mapping to a reference transcriptome - possible?
4.0 years ago by tanya_fiskur ▴ 70
7
votes
9
replies
2.8k
views
Raw counts after mapping to a reference transcriptome - possible?
rna-seq
updated 4.0 years ago by ▴ 160 • written 4.0 years ago by ▴ 70
0
votes
0
replies
2.1k
views
Comment: C: Choose version of software (e.g. minimap2) in Linux
4.0 years ago by tanya_fiskur ▴ 70
1
vote
0
replies
5.8k
views
Comment: C: "Export" package in R - do analogues exist?
4.0 years ago by tanya_fiskur ▴ 70
0
votes
0
replies
1.0k
views
Differential expression analysis after RUVseq in Galaxy
Galaxy RNA-Seq RUVseq EdgeR Limma-voom
4.0 years ago by tanya_fiskur ▴ 70
0
votes
0
replies
2.2k
views
Comment: C: PYTHONPATH - what's wrong?
4.0 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
2.2k
views
Comment: C: PYTHONPATH - what's wrong?
4.0 years ago by tanya_fiskur ▴ 70
2
votes
4
replies
2.2k
views
PYTHONPATH - what's wrong?
SQANTI Python
4.0 years ago by tanya_fiskur ▴ 70
4
votes
8
replies
2.1k
views
Choose version of software (e.g. minimap2) in Linux
Unix minimap2
updated 4.1 years ago by ★ 27k • written 4.1 years ago by ▴ 70
0
votes
0
replies
2.1k
views
Comment: C: Choose version of software (e.g. minimap2) in Linux
4.1 years ago by tanya_fiskur ▴ 70
0
votes
0
replies
2.1k
views
Comment: C: Choose version of software (e.g. minimap2) in Linux
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
2.1k
views
Comment: C: Choose version of software (e.g. minimap2) in Linux
4.1 years ago by tanya_fiskur ▴ 70
7
votes
10
replies
1.5k
views
Does my .sam file look ok? How to convert it?
rna-seq sam
4.1 years ago by tanya_fiskur ▴ 70
0
votes
0
replies
1.5k
views
Comment: A: Does my .sam file look ok? How to convert it?
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.5k
views
Comment: C: Does my .sam file look ok? How to convert it?
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.5k
views
Comment: C: Does my .sam file look ok? How to convert it?
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
5.8k
views
Comment: C: "Export" package in R - do analogues exist?
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
5.8k
views
Comment: C: "Export" package in R - do analogues exist?
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
5.8k
views
Comment: C: "Export" package in R - do analogues exist?
4.1 years ago by tanya_fiskur ▴ 70
4
votes
9
replies
5.8k
views
"Export" package in R - do analogues exist?
R
updated 4.1 years ago by 87k • written 4.1 years ago by ▴ 70
0
votes
0
replies
2.2k
views
Comment: C: Transcript length distribution plot, based on genome + annotation
4.1 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
2.2k
views
Comment: C: Transcript length distribution plot, based on genome + annotation
4.2 years ago by tanya_fiskur ▴ 70
1
vote
5
replies
2.2k
views
Transcript length distribution plot, based on genome + annotation
pacbio genome
updated 4.2 years ago by 3.9k • written 4.2 years ago by ▴ 70
0
votes
1
reply
1.4k
views
Comment: C: Question about species, supported by the clusterProfiler R package
4.2 years ago by tanya_fiskur ▴ 70
0
votes
1
reply
1.4k
views
Comment: C: Question about species, supported by the clusterProfiler R package
4.2 years ago by tanya_fiskur ▴ 70
52 results • Page 1 of 2
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