Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
2
votes
1
reply
1.8k
views
Comment:
Comment: Bulk RNA seq: all p adjusted are the same
23 months ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.2k
views
Comment:
Comment: How to learn bioinformatics?
23 months ago by
Marco Pannone
▴ 790
0
votes
1
reply
991
views
Comment:
Comment: GSEA not returning significant gene sets
23 months ago by
Marco Pannone
▴ 790
5
votes
1
reply
2.2k
views
Answer:
Answer: How to learn bioinformatics?
23 months ago by
Marco Pannone
▴ 790
0
votes
0
replies
565
views
Comment:
Comment: How to search and identify the function of DEGs
23 months ago by
Marco Pannone
▴ 790
0
votes
0
replies
565
views
Comment:
Comment: How to search and identify the function of DEGs
23 months ago by
Marco Pannone
▴ 790
1
vote
1
reply
785
views
Comment:
Comment: Merge featurecounts lists
24 months ago by
Marco Pannone
▴ 790
0
votes
0
replies
665
views
Comment:
Comment: Comparing overrepresented sequences from fastqc.txt file
24 months ago by
Marco Pannone
▴ 790
0
votes
0
replies
683
views
Comment:
Comment: Aggregation of bulk RNA-seq
24 months ago by
Marco Pannone
▴ 790
1
vote
0
replies
2.1k
views
Answer:
Answer: determine sex ratio from the bam file
2.0 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
701
views
Comment:
Comment: Merging a low quality run of a sample with a high quality run (RNAseq)
2.1 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
701
views
Comment:
Comment: Merging a low quality run of a sample with a high quality run (RNAseq)
2.1 years ago by
Marco Pannone
▴ 790
1
vote
1
reply
453
views
Answer:
Answer: Network visualization
2.1 years ago by
Marco Pannone
▴ 790
3
votes
0
replies
376
views
Comment:
Comment: concatenated datasets for HISAT2 alignment
2.1 years ago by
Marco Pannone
▴ 790
1
vote
1
reply
2.5k
views
Comment:
Comment: Error with per tile sequence quality (by FastQC)
2.1 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.5k
views
Comment:
Comment: Error with per tile sequence quality (by FastQC)
2.1 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.7k
views
Comment:
Comment: make a BED file with exons only
2.1 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.5k
views
Comment:
Comment: Error with per tile sequence quality (by FastQC)
2.1 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
588
views
Comment:
Comment: What does it mean by local structure?
2.1 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
3.0k
views
Comment:
Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by
Marco Pannone
▴ 790
1
vote
1
reply
3.0k
views
Comment:
Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
857
views
Comment:
Comment: Bowtie produced empty .sam file
2.1 years ago by
Marco Pannone
▴ 790
2
votes
1
reply
3.0k
views
Comment:
Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
657
views
Comment:
Comment: Cytoscape network analysis
2.1 years ago by
Marco Pannone
▴ 790
1
vote
2
replies
657
views
Cytoscape network analysis
protein-protein
network
interaction
Cytoscape
2.1 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
953
views
Comment:
Comment: featureCounts stuck
2.2 years ago by
Marco Pannone
▴ 790
0
votes
4
replies
953
views
featureCounts stuck
featureCounts
rnaseq
updated 2.1 years ago by
GenoMax
142k • written 2.2 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
1.6k
views
Comment:
Comment: Pseudocounts in RNA-seq analysis
2.2 years ago by
Marco Pannone
▴ 790
1
vote
3
replies
1.6k
views
Pseudocounts in RNA-seq analysis
pseudo
rnaseq
counts
deseq2
updated 2.2 years ago by
ATpoint
82k • written 2.2 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
1.4k
views
Comment:
Comment: featureCounts : GFF3 gene identifier and low percentage of assigned alignments
2.4 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
733
views
Comment:
Comment: Generating multiple heatmaps with heatmap3 and lapply
2.4 years ago by
Marco Pannone
▴ 790
3
votes
2
replies
733
views
Generating multiple heatmaps with heatmap3 and lapply
heatmap3
rstudio
heatmaps
lapply
2.4 years ago by
Marco Pannone
▴ 790
2
votes
1
reply
2.4k
views
Answer:
Answer: How to merge samples of the same cell type to do differential peak calling?
2.4 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
874
views
Comment:
Comment: Question regarding Enhancers
2.4 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
2.7k
views
Comment:
Comment: merging .narrowPeak files with all of the columns they have
2.4 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.7k
views
Comment:
Comment: merging .narrowPeak files with all of the columns they have
2.4 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.7k
views
Comment:
Comment: merging .narrowPeak files with all of the columns they have
2.4 years ago by
Marco Pannone
▴ 790
1
vote
0
replies
1.2k
views
Comment:
Comment: genomecov VS bamCoverage
2.4 years ago by
Marco Pannone
▴ 790
1
vote
1
reply
2.7k
views
Comment:
Comment: merging .narrowPeak files with all of the columns they have
2.4 years ago by
Marco Pannone
▴ 790
2
votes
0
replies
1.1k
views
Comment:
Comment: Filtering Gene by mean expression
2.4 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
1.1k
views
Comment:
Comment: Filtering Gene by mean expression
2.4 years ago by
Marco Pannone
▴ 790
1
vote
1
reply
1.7k
views
Comment:
Comment: HTSeq-count : is it same to use .bam file or .sam file?
2.4 years ago by
Marco Pannone
▴ 790
0
votes
2
replies
1.8k
views
Comment:
Comment: featureCounts fragment count
2.4 years ago by
Marco Pannone
▴ 790
0
votes
1
reply
2.7k
views
Answer:
Answer: BAM file reads mapping to multiple genes
2.5 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
1.2k
views
Comment:
Comment: Correlation Network with Cytoscape
2.5 years ago by
Marco Pannone
▴ 790
6
votes
3
replies
1.2k
views
Forum:
Computational Biology Conference
biology
computational
science
research
conference
updated 2.5 years ago by
WouterDeCoster
47k • written 2.5 years ago by
Marco Pannone
▴ 790
1
vote
0
replies
1.8k
views
Comment:
Comment: how to find each cluster in single-cell represent which cell type?
2.5 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
975
views
Comment:
Comment: How to get DEGs compare one sample to another?
2.5 years ago by
Marco Pannone
▴ 790
1
vote
1
reply
810
views
Answer:
Answer: Gene Ontology
2.5 years ago by
Marco Pannone
▴ 790
0
votes
0
replies
1.4k
views
Comment:
Comment: Problem extracting differentially expressed genes using diffxpy
2.5 years ago by
Marco Pannone
▴ 790
194 results • Page
3 of 4
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6