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Comment: C: high sequence duplication ddRAD
5.3 years ago by gubrins ▴ 350
5
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4
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2.4k
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high sequence duplication ddRAD
ddrad duplication sequencing SNP
updated 5.3 years ago by 12k • written 5.3 years ago by ▴ 350
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Comment: C: high sequence duplication ddRAD
5.3 years ago by gubrins ▴ 350
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1.7k
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Comment: C: Use fastQC and then multiQC on ddRAD fastq files ?
5.3 years ago by gubrins ▴ 350
2
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2.1k
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Tutorial STACKS ddRADseq
STACKS ddRADseq
updated 5.3 years ago by 154k • written 5.3 years ago by ▴ 350
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0
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616
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Heterozygous individuals and FastaAlternateReferenceMarker
GATK FASTA SNP
5.4 years ago by gubrins ▴ 350
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1.7k
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Multisample VCF to FASTA
vcf fasta GATK
updated 5.5 years ago by 89k • written 5.5 years ago by ▴ 350
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5
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5.7k
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quality check of bam files
gatk bam sam quality
updated 5.5 years ago by 166k • written 5.5 years ago by ▴ 350
2
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1
reply
1.2k
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SNP calling specific genes with GATK
gatk vcf target-capture sequencing target capture
updated 5.5 years ago by ▴ 970 • written 5.5 years ago by ▴ 350
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5.7k
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Comment: C: quality check of bam files
5.5 years ago by gubrins ▴ 350
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1
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7.3k
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Comment: C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
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4.3k
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Comment: C: Improve the speed of Haplotypecaller
5.5 years ago by gubrins ▴ 350
5
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4
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4.3k
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Improve the speed of Haplotypecaller
gatk vcf bam haplotypecaller
updated 5.5 years ago by 166k • written 5.5 years ago by ▴ 350
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4.3k
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Comment: C: Improve the speed of Haplotypecaller
5.5 years ago by gubrins ▴ 350
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1
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3.8k
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Comment: C: StrandBiasBySample error Haplotypecaller
5.5 years ago by gubrins ▴ 350
4
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7
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3.8k
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StrandBiasBySample error Haplotypecaller
haplotypecaller gatk strandbiasbysample
updated 5.5 years ago by 166k • written 5.5 years ago by ▴ 350
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2.6k
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Comment: C: Merging bam files with GATK
5.5 years ago by gubrins ▴ 350
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2.6k
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Comment: C: Merging bam files with GATK
5.5 years ago by gubrins ▴ 350
0
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2.6k
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Comment: C: Merging bam files with GATK
5.5 years ago by gubrins ▴ 350
0
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1
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7.3k
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Comment: C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
0
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1
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7.3k
views
Comment: C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
0
votes
1
reply
7.3k
views
Comment: C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
0
votes
1
reply
7.3k
views
Comment: C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
0
votes
1
reply
7.3k
views
Comment: C: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
1
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1
reply
4.5k
views
Comment: C: Haplotype resolving (phasing) from BAM file
5.5 years ago by gubrins ▴ 350
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2
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7.3k
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Answer: A: Imputation with BEAGLE 5.1 giving an inconsistent number of alleles error
5.5 years ago by gubrins ▴ 350
0
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0
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1.6k
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Phasing with Beagle
beagle phasing haplotypes
5.5 years ago by gubrins ▴ 350
0
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0
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866
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Comment: C: Regular coverage in target capture sequencing
5.5 years ago by gubrins ▴ 350
1
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2
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866
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Regular coverage in target capture sequencing
target capture targeting coverage
5.6 years ago by gubrins ▴ 350
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1
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2.7k
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Comment: C: Coverage per gene
5.6 years ago by gubrins ▴ 350
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2.7k
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Comment: C: Coverage per gene
5.6 years ago by gubrins ▴ 350
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1
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2.7k
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Comment: C: Coverage per gene
5.6 years ago by gubrins ▴ 350
6
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6
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2.7k
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Coverage per gene
gene-coverage bed bedtools
updated 2.6 years ago by 45k • written 5.6 years ago by ▴ 350
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1
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193k
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Comment: C: Extract Reads From A Bam File That Fall Within A Given Region
5.6 years ago by gubrins ▴ 350
2
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4
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1.3k
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Coverage of target genes
coverage target capture target capturing BAM VCF
5.6 years ago by gubrins ▴ 350
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1
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1.3k
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Comment: A: Coverage of target genes
5.6 years ago by gubrins ▴ 350
0
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0
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1.3k
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Comment: A: Coverage of target genes
5.6 years ago by gubrins ▴ 350
0
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1
reply
193k
views
Comment: A: Extract Reads From A Bam File That Fall Within A Given Region
5.6 years ago by gubrins ▴ 350
0
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0
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2.6k
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Answer: A: Haplotype Mapping from a VCF file (Homologous SNPs)
5.6 years ago by gubrins ▴ 350
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0
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1.1k
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Comment: C: Target capture sequencing
5.6 years ago by gubrins ▴ 350
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0
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1.1k
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Comment: C: Target capture sequencing
5.6 years ago by gubrins ▴ 350
0
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4
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1.1k
views
Target capture sequencing
target capture sequencing targeted sequencing
5.6 years ago by gubrins ▴ 350
192 results • Page 4 of 4
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