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Comment: C: How to extract calculated RSA values from dssp and its corresponding residue?
3.4 years ago by tpm ▴ 30
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1.7k
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Comment: C: How to extract calculated RSA values from dssp and its corresponding residue?
3.4 years ago by tpm ▴ 30
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3.2k
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Comment: C: Biopython module Bio.PDB.DSSP issue with solvent accessible surface area?
3.4 years ago by tpm ▴ 30
3
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4
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1.7k
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How to extract calculated RSA values from dssp and its corresponding residue?
pdb dssp RSA biopython commandline
3.4 years ago by tpm ▴ 30
0
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3.2k
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Comment: C: Input file for CompareCluster in ClusterProfiler
3.7 years ago by tpm ▴ 30
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3.2k
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Answer: C: Input file for CompareCluster in ClusterProfiler
3.7 years ago by tpm ▴ 30
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7.7k
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Comment: C: How to run protein-protein interaction on R using STRING database
3.7 years ago by tpm ▴ 30
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0
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643
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How can I use DAVID Database on comparing proteomic IDs from wild type and knockout strains on upregulated and downregulated protein levels?
DAVIDdatabase protein_networks
updated 3.8 years ago by 20 • written 3.9 years ago by ▴ 30
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1
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1.1k
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Answer: C: compareCluster error: On clusterProfiler DEGs enrichments analysis
3.9 years ago by tpm ▴ 30
1
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2
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1.1k
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compareCluster error: On clusterProfiler DEGs enrichments analysis
clusterProfiler Bioconductor R DEGs
3.9 years ago by tpm ▴ 30
0
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0
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912
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Comment: C: How to pull logFC values for a select ENTREZID from a gene-list on R?
3.9 years ago by tpm ▴ 30
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1
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912
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Comment: C: How to pull logFC values for a select ENTREZID from a gene-list on R?
3.9 years ago by tpm ▴ 30
0
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1
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912
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Comment: C: How to pull logFC values for a select ENTREZID from a gene-list on R?
3.9 years ago by tpm ▴ 30
2
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5
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912
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How to pull logFC values for a select ENTREZID from a gene-list on R?
bioconductor R DEP
3.9 years ago by tpm ▴ 30
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0
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576
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Comment: C: How to convert these IDs with slash (/) sign to a list?
3.9 years ago by tpm ▴ 30
2
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2
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576
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How to convert these IDs with slash (/) sign to a list?
gene
updated 9 months ago by 43k • written 3.9 years ago by ▴ 30
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1.8k
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Comment: C: How to simultaneously convert gene IDs to Kegg IDs for E. coli
3.9 years ago by tpm ▴ 30
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1
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1.8k
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Comment: C: How to simultaneously convert gene IDs to Kegg IDs for E. coli
3.9 years ago by tpm ▴ 30
0
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1
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1.8k
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Comment: C: How to simultaneously convert gene IDs to Kegg IDs for E. coli
3.9 years ago by tpm ▴ 30
0
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6
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1.8k
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How to simultaneously convert gene IDs to Kegg IDs for E. coli
geneID kegg bioconductor
updated 3.9 years ago by 87k • written 3.9 years ago by ▴ 30
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0
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1.8k
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Comment: C: kegg id convertion
3.9 years ago by tpm ▴ 30
1
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1.8k
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Comment: C: What codes do I use to generate gene cluster vectors with entrez gene id on clus
3.9 years ago by tpm ▴ 30
0
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1
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891
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compareProfiler - Assistance on how I can modify codes for different states
clusterProfiler bioconductor assembly R
3.9 years ago by tpm ▴ 30
4
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6
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1.8k
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What codes do I use to generate gene cluster vectors with entrez gene id on clusterProfiler.
clusterProfiler enrichGO DEP R BIOCONDUCTOR
updated 3.0 years ago by 87k • written 3.9 years ago by ▴ 30
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0
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1.8k
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Comment: A: What codes do I use to generate gene cluster vectors with entrez gene id on clus
3.9 years ago by tpm ▴ 30
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1.0k
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Comment: C: I have differentially expressed protein IDs that were scored between Wild-type E
3.9 years ago by tpm ▴ 30
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1
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1.0k
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Comment: C: I have differentially expressed protein IDs that were scored between Wild-type E
3.9 years ago by tpm ▴ 30
2
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4
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1.0k
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I have differentially expressed protein IDs that were scored between Wild-type E coli and E coli (with knockout gene). How can I generate a plot to s…
GeneOntology GO GOSlim Proteins
3.9 years ago by tpm ▴ 30
1
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9
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7.7k
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How to run protein-protein interaction on R using STRING database
stringdb
updated 3.9 years ago by ▴ 20 • written 4.0 years ago by ▴ 30
0
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1
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804
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Comment: C: Is it possible to convert several protein ID in to Fasta format?
3.9 years ago by tpm ▴ 30
0
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0
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859
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Comment: A: Which bioinformatic tool can I use to assess overlapping genes between 2 dataset
3.9 years ago by tpm ▴ 30
0
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3
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859
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Which bioinformatic tool can I use to assess overlapping genes between 2 datasets
bioimformatictools toolbox proteins
3.9 years ago by tpm ▴ 30
0
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1
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804
views
Comment: A: Is it possible to convert several protein ID in to Fasta format?
3.9 years ago by tpm ▴ 30
0
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7
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804
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Is it possible to convert several protein ID in to Fasta format?
sequence fasta
3.9 years ago by tpm ▴ 30
0
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1
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804
views
Comment: C: Is it possible to convert several protein ID in to Fasta format?
3.9 years ago by tpm ▴ 30
0
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1
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1.4k
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Comment: C: How to run protein-protein interaction on R using STRING database
4.0 years ago by tpm ▴ 30
2
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3
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1.4k
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How to run protein-protein interaction on R using STRING database
R stringdb
updated 4.0 years ago by 27k • written 4.0 years ago by ▴ 30
0
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1
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7.7k
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Comment: C: How to run protein-protein interaction on R using STRING database
4.0 years ago by tpm ▴ 30
0
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0
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2.6k
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Comment: C: Is it possible to select the active interaction source in R STRINGdb package lik
4.0 years ago by tpm ▴ 30
0
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0
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1.9k
views
Comment: C: Pulling TSV automatically from STRINGDB
4.0 years ago by tpm ▴ 30
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