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0
votes
2
replies
344
views
Alternative tool or website of PathogenFinder
WGS
bacteria
updated 28 days ago by
GenoMax
140k • written 7 weeks ago by
Pegasus
▴ 100
0
votes
1
reply
344
views
Answer:
Answer: Alternative tool or website of PathogenFinder
28 days ago by
Pegasus
▴ 100
2
votes
3
replies
539
views
Contigs number vs NNN gap % in WGS
WGS
updated 5 weeks ago by
GenoMax
140k • written 8 weeks ago by
Pegasus
▴ 100
0
votes
0
replies
539
views
Comment:
Comment: Contigs number vs NNN gap % in WGS
5 weeks ago by
Pegasus
▴ 100
0
votes
0
replies
587
views
Comment:
Comment: Finding EntreZ IDs for refseq IDs
8 weeks ago by
Pegasus
▴ 100
0
votes
1
reply
587
views
Comment:
Comment: Finding EntreZ IDs for refseq IDs
11 weeks ago by
Pegasus
▴ 100
0
votes
1
reply
587
views
Comment:
Comment: Finding EntreZ IDs for refseq IDs
11 weeks ago by
Pegasus
▴ 100
6
votes
7
replies
587
views
Finding EntreZ IDs for refseq IDs
RNA-SEQ
8 weeks ago by
Pegasus
▴ 100
0
votes
0
replies
3.0k
views
Comment:
Comment: What is NCBI Gene ID, where to find it and how to convert to entrez ID?
10 months ago by
Pegasus
▴ 100
0
votes
2
replies
3.0k
views
Comment:
Comment: What is NCBI Gene ID, where to find it and how to convert to entrez ID?
10 months ago by
Pegasus
▴ 100
0
votes
0
replies
671
views
Comment:
Comment: Converting RefSeq protein accession IDs into entreZ IDs
10 months ago by
Pegasus
▴ 100
1
vote
2
replies
671
views
Converting RefSeq protein accession IDs into entreZ IDs
RNA-SEQ
10 months ago by
Pegasus
▴ 100
0
votes
0
replies
733
views
Comment:
Comment: Find data-based Gene_IDs for unknown gene_IDs in gtf.file
10 months ago by
Pegasus
▴ 100
0
votes
1
reply
733
views
Comment:
Comment: Find data-based Gene_IDs for unknown gene_IDs in gtf.file
10 months ago by
Pegasus
▴ 100
0
votes
1
reply
733
views
Comment:
Comment: Find data-based Gene_IDs for unknown gene_IDs in gtf.file
10 months ago by
Pegasus
▴ 100
2
votes
6
replies
733
views
Find data-based Gene_IDs for unknown gene_IDs in gtf.file
RNA-SEQ
annotation
GO-term
10 months ago by
Pegasus
▴ 100
0
votes
0
replies
668
views
Comment:
Comment: Gene Ontology / Hypothetical proteins
11 months ago by
Pegasus
▴ 100
2
votes
2
replies
668
views
Gene Ontology / Hypothetical proteins
RNA-SEQ
terms
GO
11 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.1k
views
Comment:
Comment: GFF/GTF file error / featureCounts
11 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.1k
views
Comment:
Comment: GFF/GTF file error / featureCounts
11 months ago by
Pegasus
▴ 100
1
vote
5
replies
1.1k
views
GFF/GTF file error / featureCounts
RNA-SEQ
updated 11 months ago by
barslmn
★ 2.1k • written 11 months ago by
Pegasus
▴ 100
0
votes
0
replies
951
views
Comment:
Comment: FeatureCounts >edgeR > GO
12 months ago by
Pegasus
▴ 100
0
votes
0
replies
384
views
Link products to their genes
RNA-SEQ
GO
edgeR
12 months ago by
Pegasus
▴ 100
0
votes
1
reply
762
views
Comment:
Comment: How to extract/find the actual names of the gene_IDs if they are not fully prese
12 months ago by
Pegasus
▴ 100
1
vote
3
replies
762
views
How to extract/find the actual names of the gene_IDs if they are not fully presented in gtf.file, and link them to the Count.matrix
featureCounts
gtf
RNA-Seq
updated 12 months ago by
GenoMax
140k • written 12 months ago by
Pegasus
▴ 100
0
votes
1
reply
951
views
Comment:
Comment: FeatureCounts >edgeR > GO
12 months ago by
Pegasus
▴ 100
2
votes
4
replies
951
views
FeatureCounts >edgeR > GO
RNA-SEQ
12 months ago by
Pegasus
▴ 100
0
votes
0
replies
674
views
Comment:
Comment: RNA-seq data analysis (prokaryotes) featurecounts with
12 months ago by
Pegasus
▴ 100
1
vote
2
replies
674
views
RNA-seq data analysis (prokaryotes) featurecounts with
featureCounts
RNA-Seq
12 months ago by
Pegasus
▴ 100
0
votes
0
replies
1.1k
views
Comment:
Comment: Trimmomatic generated two (reverse-forward) paired-files with different number o
12 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.1k
views
Comment:
Comment: Trimmomatic generated two (reverse-forward) paired-files with different number o
12 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.1k
views
Comment:
Comment: Trimmomatic generated two (reverse-forward) paired-files with different number o
12 months ago by
Pegasus
▴ 100
5
votes
6
replies
1.1k
views
Trimmomatic generated two (reverse-forward) paired-files with different number of reads
Trimmomatic
RNA-Seq
12 months ago by
Pegasus
▴ 100
1
vote
0
replies
898
views
Answer:
Answer: R removes 1st column (gene-id) from featureCounts count.txt table
12 months ago by
Pegasus
▴ 100
4
votes
3
replies
898
views
R removes 1st column (gene-id) from featureCounts count.txt table
featureCounts
RNA-Seq
R
12 months ago by
Pegasus
▴ 100
0
votes
0
replies
1.8k
views
Comment:
Comment: PROKKA.gff file is not compatible with featureCounts
13 months ago by
Pegasus
▴ 100
0
votes
0
replies
1.8k
views
Comment:
Comment: Does readDGE work with data frames?
13 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.8k
views
Comment:
Comment: PROKKA.gff file is not compatible with featureCounts
13 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.8k
views
Comment:
Comment: PROKKA.gff file is not compatible with featureCounts
13 months ago by
Pegasus
▴ 100
4
votes
9
replies
1.8k
views
PROKKA.gff file is not compatible with featureCounts
featureCounts
RNA-seq
13 months ago by
Pegasus
▴ 100
0
votes
1
reply
1.8k
views
Comment:
Comment: PROKKA.gff file is not compatible with featureCounts
13 months ago by
Pegasus
▴ 100
0
votes
0
replies
1.8k
views
Comment:
Comment: PROKKA.gff file is not compatible with featureCounts
13 months ago by
Pegasus
▴ 100
0
votes
0
replies
2.3k
views
Comment:
Comment: Error in reading ballgown object
13 months ago by
Pegasus
▴ 100
0
votes
0
replies
2.2k
views
Comment:
Comment: ballgown and pData
13 months ago by
Pegasus
▴ 100
0
votes
0
replies
388
views
why count_matrix.csv generated by "prepDE.py3" showed unidentified IDs
Stringtie
RNA-seq
13 months ago by
Pegasus
▴ 100
2
votes
11
replies
2.3k
views
bedGraph to bigwig
IGV
RNA-seq
updated 13 months ago by
Ram
43k • written 14 months ago by
Pegasus
▴ 100
0
votes
0
replies
2.3k
views
Comment:
Comment: bedGraph to bigwig
14 months ago by
Pegasus
▴ 100
0
votes
1
reply
2.3k
views
Comment:
Comment: bedGraph to bigwig
updated 14 months ago by
GenoMax
140k • written 14 months ago by
Pegasus
▴ 100
0
votes
1
reply
2.3k
views
Comment:
Comment: bedGraph to bigwig
14 months ago by
Pegasus
▴ 100
0
votes
1
reply
2.3k
views
Comment:
Comment: bedGraph to bigwig
14 months ago by
Pegasus
▴ 100
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