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Comment: Comment: Batch effect correction of 2 studies with different covariates
4.4 years ago by Dunois ★ 2.9k
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1.5k
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Comment: Comment: How to find single copy family from InParanoid output
4.4 years ago by Dunois ★ 2.9k
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Comment: Comment: Batch effect correction of RNA-Seq data
4.4 years ago by Dunois ★ 2.9k
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1.7k
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Answer: Answer: Finding how many times a nucleotide appear in the same position
4.4 years ago by Dunois ★ 2.9k
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3.6k
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Comment: Comment: RNAseq data analysis of pooled data
4.4 years ago by Dunois ★ 2.9k
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3.6k
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Comment: Comment: RNAseq data analysis of pooled data
4.4 years ago by Dunois ★ 2.9k
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2.2k
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Comment: Comment: Using outgroup in gene family dendograms
4.4 years ago by Dunois ★ 2.9k
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4.8k
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Comment: Comment: bioinformatics thesis
4.5 years ago by Dunois ★ 2.9k
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4.8k
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Comment: Comment: bioinformatics thesis
4.5 years ago by Dunois ★ 2.9k
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1.8k
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Comment: Comment: RNA-SEQ count data as input for Machine Learning
4.5 years ago by Dunois ★ 2.9k
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2.9k
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Comment: Comment: How are transcriptome annotations published?
4.5 years ago by Dunois ★ 2.9k
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4.8k
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Comment: Comment: bioinformatics thesis
4.5 years ago by Dunois ★ 2.9k
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4.8k
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Comment: Comment: bioinformatics thesis
4.5 years ago by Dunois ★ 2.9k
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1
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2.8k
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Comment: Comment: Assessing read support for coding sequences predicted by TransDecoder
4.5 years ago by Dunois ★ 2.9k
6
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11
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2.9k
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How are transcriptome annotations published?
RNAseq annotation publish transcriptome
4.1 years ago by Dunois ★ 2.9k
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1
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2.8k
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Comment: Comment: Assessing read support for coding sequences predicted by TransDecoder
4.5 years ago by Dunois ★ 2.9k
1
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1
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2.8k
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Comment: Comment: Assessing read support for coding sequences predicted by TransDecoder
4.5 years ago by Dunois ★ 2.9k
2
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1
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1.1k
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Orthology and sequence identity/similarity
identity similarity orthology homology
updated 4.5 years ago by ★ 30k • written 4.5 years ago by ★ 2.9k
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1.6k
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Comment: Comment: Finding ORFs from RNA-seq Sequence Data of eukaryotic species
4.5 years ago by Dunois ★ 2.9k
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0
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893
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Why does KAAS use SBH for partial genomes?
orthology blast reciprocal best hit annotation
4.6 years ago by Dunois ★ 2.9k
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1
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7.2k
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Comment: C: What programming language do you use the most in your work? Which one do you lik
4.6 years ago by Dunois ★ 2.9k
1
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1
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936
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Create pseudo-replicates by "evenly" splitting reads file?
RNA-Seq Assembly paired-end reads
4.6 years ago by Dunois ★ 2.9k
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2.9k
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Comment: C: What to do when transcriptome assembly quality metrics do not concur. How can yo
4.6 years ago by Dunois ★ 2.9k
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6
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2.2k
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Why do the number of domains in these two orthologs differ? Why is hmmscan annotating one of these sequences incorrectly?
orthology pfam hmmer annotation domains
updated 4.6 years ago by ★ 30k • written 4.6 years ago by ★ 2.9k
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1
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2.2k
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Comment: C: Why do the number of domains in these two orthologs differ? Why is hmmscan annot
4.6 years ago by Dunois ★ 2.9k
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1
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2.9k
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Comment: C: What to do when transcriptome assembly quality metrics do not concur. How can yo
4.6 years ago by Dunois ★ 2.9k
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0
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4.5k
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Comment: C: Merge two columns by having alternating rows
4.6 years ago by Dunois ★ 2.9k
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1
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2.9k
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Comment: C: What to do when transcriptome assembly quality metrics do not concur. How can yo
4.6 years ago by Dunois ★ 2.9k
1
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1
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2.9k
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Comment: Comment: What to do when transcriptome assembly quality metrics do not concur. How can yo
4.3 years ago by Dunois ★ 2.9k
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0
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1.6k
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Comment: C: Help on local alignment. Is there any way to automate the process?
4.6 years ago by Dunois ★ 2.9k
0
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1
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1.6k
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Comment: C: Help on local alignment. Is there any way to automate the process?
4.6 years ago by Dunois ★ 2.9k
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1.1k
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Comment: C: Does Nucleotide Alignment can Translate into Proteins (Amino Acids)?
4.6 years ago by Dunois ★ 2.9k
0
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1
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1.6k
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Comment: C: Help on local alignment. Is there any way to automate the process?
4.6 years ago by Dunois ★ 2.9k
0
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1
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1.6k
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Comment: C: Help on local alignment. Is there any way to automate the process?
4.6 years ago by Dunois ★ 2.9k
1
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1
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1.3k
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How to sort a FASTA file and (its) BAM file in the same order?
fasta bam samtools
4.6 years ago by Dunois ★ 2.9k
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2.1k
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Comment: C: GO enrichment analysis in R on Solanum lycopersicum proteomics dataset
4.7 years ago by Dunois ★ 2.9k
3
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2
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982
views
What proportion of the (coding) genome is actually expressed at any given time?
genome gene expression RNA-Seq
updated 4.7 years ago by 153k • written 4.7 years ago by ★ 2.9k
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1.4k
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Comment: C: Annotating two columns at the same time
4.7 years ago by Dunois ★ 2.9k
1
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0
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1.2k
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Comment: C: Identification of lncRNA target genes
4.7 years ago by Dunois ★ 2.9k
1
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1
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3.5k
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Comment: C: sortmerna terminates without generating the file with rRNA being removed
4.7 years ago by Dunois ★ 2.9k
2
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0
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3.4k
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Comment: C: Mutating columns by changing units - R/dplyr solution
4.7 years ago by Dunois ★ 2.9k
3
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1
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3.4k
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Answer: A: Mutating columns by changing units - R/dplyr solution
4.7 years ago by Dunois ★ 2.9k
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1
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3.4k
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Comment: C: Mutating columns by changing units - R/dplyr solution
4.7 years ago by Dunois ★ 2.9k
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1
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3.4k
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Comment: C: Mutating columns by changing units - R/dplyr solution
4.7 years ago by Dunois ★ 2.9k
0
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0
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2.1k
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Comment: C: Protein Structure Chains
4.7 years ago by Dunois ★ 2.9k
0
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1
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3.5k
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Comment: C: sortmerna terminates without generating the file with rRNA being removed
4.7 years ago by Dunois ★ 2.9k
1
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1
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3.5k
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Comment: C: sortmerna terminates without generating the file with rRNA being removed
4.7 years ago by Dunois ★ 2.9k
0
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0
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11k
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Comment: C: How to handle duplicate row names in R
4.7 years ago by Dunois ★ 2.9k
1
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1.9k
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Comment: C: I'm highly motivated
4.7 years ago by Dunois ★ 2.9k
0
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2
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3.5k
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Answer: C: sortmerna terminates without generating the file with rRNA being removed
4.7 years ago by Dunois ★ 2.9k
595 results • Page 9 of 12
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