Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
1.4k
views
Comment: Comment: How can I compare the similarities of two transcriptomes?
4.4 years ago by Pratik ★ 1.1k
0
votes
0
replies
1.4k
views
Comment: Comment: Cannot great a gene by gene matrix in Rstudio
4.4 years ago by Pratik ★ 1.1k
1
vote
1
reply
1.4k
views
Answer: Answer: Cannot great a gene by gene matrix in Rstudio
4.4 years ago by Pratik ★ 1.1k
1
vote
1
reply
5.7k
views
Answer: Answer: GTF file how do I search for duplicates of Gene ID and print them out
4.4 years ago by Pratik ★ 1.1k
0
votes
1
reply
3.1k
views
Comment: Comment: extracting ensembl gene id or entrez gene id from a gene annotation file for BIN
4.4 years ago by Pratik ★ 1.1k
0
votes
2
replies
5.7k
views
Comment: Comment: GTF file how do I search for duplicates of Gene ID and print them out
4.4 years ago by Pratik ★ 1.1k
1
vote
2
replies
3.1k
views
Comment: Comment: extracting ensemble gene id or entrez gene id from a gene annotation file for B
4.4 years ago by Pratik ★ 1.1k
1
vote
0
replies
1.8k
views
Tutorial: How to: make Camellia sinensis var. sinensis (black tea) custom annotation files for BINGO Cytoscape
bingo cytoscape
4.4 years ago by Pratik ★ 1.1k
0
votes
0
replies
4.1k
views
Comment: Comment: How do I make a ComplexHeatmap from this dataframe?
4.4 years ago by Pratik ★ 1.1k
10
votes
10
replies
4.1k
views
6 follow
How do I make a ComplexHeatmap from this dataframe?
scaling scale heatmap
4.4 years ago by Pratik ★ 1.1k
1
vote
0
replies
4.1k
views
Comment: Comment: How do I make a ComplexHeatmap from this dataframe?
4.4 years ago by Pratik ★ 1.1k
0
votes
0
replies
4.1k
views
Comment: Comment: How do I make a ComplexHeatmap from this dataframe?
4.4 years ago by Pratik ★ 1.1k
0
votes
1
reply
4.1k
views
Comment: Comment: How do I make a ComplexHeatmap from this dataframe?
4.4 years ago by Pratik ★ 1.1k
0
votes
0
replies
4.1k
views
Comment: Comment: How do I make a ComplexHeatmap from this dataframe?
4.4 years ago by Pratik ★ 1.1k
1
vote
1
reply
3.1k
views
Answer: Answer: extracting ensemble gene id or entrez gene id from a gene annotation file for B
4.4 years ago by Pratik ★ 1.1k
0
votes
1
reply
3.4k
views
Answer: Answer: Spatial transcriptomics data
4.4 years ago by Pratik ★ 1.1k
2
votes
0
replies
23k
views
Answer: Answer: How to convert bulk UniProt Id to GO terms/Ids?
4.4 years ago by Pratik ★ 1.1k
1
vote
1
reply
11k
views
Answer: Answer: Seurat to Dataframe with ONLY counts, cells, and cluster labels?
4.5 years ago by Pratik ★ 1.1k
7
votes
7
replies
9.8k
views
How to fix missing values error message after SCTransform (Seurat)?
Seurat R SCTransform
4.5 years ago by Pratik ★ 1.1k
2
votes
0
replies
9.8k
views
Answer: Answer: How to fix missing values error message after SCTransform (Seurat)?
4.5 years ago by Pratik ★ 1.1k
0
votes
0
replies
9.8k
views
Comment: Comment: How to fix missing values error message after SCTransform (Seurat)?
4.5 years ago by Pratik ★ 1.1k
0
votes
1
reply
9.8k
views
Comment: Comment: How to fix missing values error message after SCTransform (Seurat)?
4.5 years ago by Pratik ★ 1.1k
0
votes
1
reply
9.8k
views
Comment: Comment: How to fix missing values error message after SCTransform (Seurat)?
4.5 years ago by Pratik ★ 1.1k
0
votes
0
replies
3.7k
views
Comment: Comment: How to interpret ScanPy scatter plots for QC filtering?
4.5 years ago by Pratik ★ 1.1k
4
votes
4
replies
3.7k
views
How to interpret ScanPy scatter plots for QC filtering?
Python jupyter-lab ScanPy RNA-Seq scRNA-seq
4.5 years ago by Pratik ★ 1.1k
0
votes
0
replies
3.7k
views
Comment: Comment: How to interpret ScanPy scatter plots for QC filtering?
4.5 years ago by Pratik ★ 1.1k
1
vote
1
reply
1.5k
views
Answer: A: Single-cell RNAseq for glia
4.7 years ago by Pratik ★ 1.1k
0
votes
0
replies
650
views
Database for signalling pathway agonists and antagonists?
database gene
4.7 years ago by Pratik ★ 1.1k
3
votes
2
replies
9.4k
views
Answer: A: How to transform the deg gene list from seurat to a gene list input to clusterPr
4.7 years ago by Pratik ★ 1.1k
0
votes
1
reply
4.7k
views
Comment: C: How do I use FindAllMarkers after making additional cluster assignments?
4.7 years ago by Pratik ★ 1.1k
2
votes
1
reply
4.7k
views
Answer: A: How do I use FindAllMarkers after making additional cluster assignments?
4.7 years ago by Pratik ★ 1.1k
4
votes
4
replies
4.7k
views
How do I use FindAllMarkers after making additional cluster assignments?
Seurat R single cell-RNA seq scRNA-seq
4.7 years ago by Pratik ★ 1.1k
5
votes
1
reply
20k
views
Answer: A: How to use FindSubCluster in Seurat?
4.7 years ago by Pratik ★ 1.1k
0
votes
0
replies
20k
views
Comment: C: How to use FindSubCluster in Seurat?
4.7 years ago by Pratik ★ 1.1k
3
votes
1
reply
1.7k
views
Answer: A: What Phenotype databases do you recommend for searching genes related to disease
4.7 years ago by Pratik ★ 1.1k
0
votes
1
reply
1.5k
views
Comment: C: Number of upregulated and downregulated genes from counts matrix
4.7 years ago by Pratik ★ 1.1k
1
vote
1
reply
2.7k
views
How to interpret highly variable genes plot in Scanpy?
python single-cell RNA Seq
updated 2.8 years ago by • 0 • written 4.7 years ago by ★ 1.1k
3
votes
0
replies
4.5k
views
Answer: A: How to deal with single nucleus data in Seurat
4.7 years ago by Pratik ★ 1.1k
0
votes
0
replies
2.3k
views
Comment: C: How to record Seurat DE analysis efficiently?
4.7 years ago by Pratik ★ 1.1k
0
votes
1
reply
2.3k
views
Comment: C: How to record Seurat DE analysis efficiently?
4.7 years ago by Pratik ★ 1.1k
1
vote
0
replies
2.3k
views
Answer: A: How to record Seurat DE analysis efficiently?
4.7 years ago by Pratik ★ 1.1k
6
votes
7
replies
2.3k
views
How to record Seurat DE analysis efficiently?
R RNA-Seq rna-seq
4.7 years ago by Pratik ★ 1.1k
0
votes
0
replies
2.3k
views
Comment: C: How to record Seurat DE analysis efficiently?
4.7 years ago by Pratik ★ 1.1k
2
votes
3
replies
2.0k
views
What is the difference between a heatmap-dendrogram of a gene-gene correlation matrix made from one cluster versus multiple clusters?
scRNA-Seq Seurat RNA-Seq R rna-seq
4.9 years ago by Pratik ★ 1.1k
0
votes
1
reply
2.0k
views
Comment: C: What is the difference between a heatmap-dendrogram of a gene-gene correlation m
4.9 years ago by Pratik ★ 1.1k
3
votes
0
replies
2.8k
views
Answer: A: Is there a way to use multiple processors (parallelize) to create a heatmap for
4.9 years ago by Pratik ★ 1.1k
9
votes
9
replies
2.8k
views
Is there a way to use multiple processors (parallelize) to create a heatmap for a large dataset?
parallel processing heatmap scRNA-seq
4.9 years ago by Pratik ★ 1.1k
0
votes
0
replies
12k
views
Comment: C: How do I subset a Seurat object using variable features?
4.9 years ago by Pratik ★ 1.1k
3
votes
2
replies
12k
views
How do I subset a Seurat object using variable features?
seurat RNA-Seq scRNA-seq R
updated 4.9 years ago by ▴ 840 • written 4.9 years ago by ★ 1.1k
1
vote
0
replies
2.8k
views
Comment: C: Is there a way to use multiple processors (parallelize) to create a heatmap for
4.9 years ago by Pratik ★ 1.1k
174 results • Page 3 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6