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replies
275
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Different rsID for the same chromsome, position, ref & alt allele depending on different data sources. Which one should I use?
UKB
rsID
UKB-PPP
ensembl-vep
dbsnp
15 days ago by
lsy9
▴ 20
2
votes
1
reply
327
views
How to assess performance of a GWAS analysis pipeline
benchmark
hail
GWAS
performance
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
lsy9
▴ 20
3
votes
2
replies
400
views
What is the best GWAS tool to use for a very large cohort data (UK Biobank data)?
BOLT-LMM
GWAS
regenie
SAIGE
hail
updated 11 weeks ago by
GenoMax
141k • written 11 weeks ago by
lsy9
▴ 20
2
votes
6
replies
1.1k
views
Installing ensemble VEP by running INSTALL.pl takes too long.
Ensembl
VEP
updated 7 months ago by
Ben_Ensembl
★ 2.4k • written 7 months ago by
lsy9
▴ 20
0
votes
0
replies
1.1k
views
Comment:
Comment: Installing ensemble VEP by running INSTALL.pl takes too long.
7 months ago by
lsy9
▴ 20
0
votes
0
replies
764
views
Comment:
Comment: Calculating mean NES over gene set clusters (Enrichmentmap) in GSEA
2.9 years ago by
lsy9
▴ 20
0
votes
1
reply
764
views
Combining NES and FDR q-values over gene set clusters (Enrichmentmap) in GSEA
GSEA
2.9 years ago by
lsy9
▴ 20
1
vote
1
reply
3.2k
views
How to design WGCNA: one analysis over all sample or seperate analysis (using consensus module analysis)?
WGCNA
RNA-seq
updated 3.0 years ago by
Kevin Blighe
87k • written 3.0 years ago by
lsy9
▴ 20
1
vote
5
replies
1.9k
views
Why full-length sequencing is not possible in UMI-based methods in single-cell RNA-seq
rna-seq
sequencing
updated 3.2 years ago by
dsull
★ 5.8k • written 3.2 years ago by
lsy9
▴ 20
0
votes
0
replies
1.2k
views
Comment:
C: How RNAseq PCR amplication results in duplicates
3.2 years ago by
lsy9
▴ 20
4
votes
2
replies
1.2k
views
How RNAseq PCR amplication results in duplicates
RNA-Seq
sequencing
updated 3.2 years ago by
rpolicastro
13k • written 3.2 years ago by
lsy9
▴ 20
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