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Answer: Answer: How to change the design DESeqDataSet to calculate log2foldChange in different w
18 months ago by Amr ▴ 160
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1.2k
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Comment: Comment: What is the best way to visualize the enrichment plots together after obtaining
18 months ago by Amr ▴ 160
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3
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What is the best way to visualize the enrichment plots together after obtaining them from GSEA report?
ES enrichment_plot GSEA
updated 18 months ago by ★ 2.0k • written 18 months ago by ▴ 160
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1.3k
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Comment: Comment: How to plot all enrichment plots from GSEA in one single plot in python or R?
updated 17 months ago by 43k • written 18 months ago by ▴ 160
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927
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Comment: Comment: How to add illustrative bar in ggplot2?
18 months ago by Amr ▴ 160
1
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547
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How to add color to specific groups of a boxplot in Python?
boxplot python pandas
updated 18 months ago by 11k • written 18 months ago by ▴ 160
1
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1
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728
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Error in linear regression for multiple data-frames with matplotlib
linear_regression matplotlib
updated 18 months ago by 142k • written 18 months ago by ▴ 160
1
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728
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Answer: Answer: Error in linear regression for multiple data-frames with matplotlib
18 months ago by Amr ▴ 160
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521
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Comment: Comment: How to change values on X-axis in matplotlib ?
18 months ago by Amr ▴ 160
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2
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521
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How to change values on X-axis in matplotlib ?
matplotlib python pandas
updated 18 months ago by 43k • written 18 months ago by ▴ 160
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1
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927
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Comment: Comment: How to add illustrative bar in ggplot2?
18 months ago by Amr ▴ 160
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1
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927
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Comment: Comment: How to add illustrative bar in ggplot2?
18 months ago by Amr ▴ 160
2
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6
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927
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How to add illustrative bar in ggplot2?
ggplot2 R
18 months ago by Amr ▴ 160
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2.1k
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Comment: Comment: R-studio freezes error
18 months ago by Amr ▴ 160
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2.1k
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Comment: Comment: R-studio freezes error
18 months ago by Amr ▴ 160
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2.1k
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Comment: Comment: R-studio freezes error
18 months ago by Amr ▴ 160
2
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10
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2.1k
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R-studio freezes error
RStudio offtopic
updated 18 months ago by 43k • written 18 months ago by ▴ 160
2
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1
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531
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What are the differences between significance, effect and standard deviation upon producing mitch reports?
mitch significance effect StandardDeviation R
19 months ago by Amr ▴ 160
2
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531
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Answer: Answer: What are the differences between significance, effect and standard deviation upo
19 months ago by Amr ▴ 160
2
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1
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439
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mitch report inquiries
mitch R
19 months ago by Amr ▴ 160
2
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0
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439
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Answer: Answer: mitch report inquiries
19 months ago by Amr ▴ 160
1
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3
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873
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How Wald test calculates p-values in DESeq2?
Wald p-value DESeq2
19 months ago by Amr ▴ 160
1
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0
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873
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Answer: Answer: How Wald test calculates p-values in DESeq2?
19 months ago by Amr ▴ 160
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0
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593
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Comment: Comment: How to calculate effect size between two gene sets?
19 months ago by Amr ▴ 160
5
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2
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593
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How to calculate effect size between two gene sets?
distance effectSize euclidean
updated 19 months ago by 142k • written 19 months ago by ▴ 160
2
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3
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651
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Error in mitch in R
mitch symbols gene R
updated 19 months ago by 13k • written 19 months ago by ▴ 160
2
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0
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651
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Answer: Answer: Error in mitch in R
updated 19 months ago by 13k • written 19 months ago by ▴ 160
6
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5
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1.7k
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How to select rows which has NA in any column in the dataframe in R?
dataframe NA R
updated 19 months ago by 13k • written 19 months ago by ▴ 160
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1.7k
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Comment: Comment: How to select rows which has NA in any column in the dataframe in R?
19 months ago by Amr ▴ 160
0
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2
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480
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Error in mitch reports in R
mitch R
updated 3 months ago by ★ 1.9k • written 19 months ago by ▴ 160
16
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8
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1.7k
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6 follow
How to convert Ensemble Gene IDs to gene symbols or Entrez Gene IDs?
Gene Symbols mitch IDs
updated 19 months ago by 100k • written 19 months ago by ▴ 160
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17k
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Comment: Comment: How to update rlang in R?
19 months ago by Amr ▴ 160
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1
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17k
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Comment: Comment: How to update rlang in R?
19 months ago by Amr ▴ 160
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1
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17k
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Comment: Comment: How to update rlang in R?
19 months ago by Amr ▴ 160
1
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1
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17k
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Comment: Comment: How to update rlang in R?
19 months ago by Amr ▴ 160
1
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8
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17k
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How to update rlang in R?
rlang R
19 months ago by Amr ▴ 160
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651
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Comment: Comment: Error in mitch in R
19 months ago by Amr ▴ 160
0
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703
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Comment: Comment: How to take data from dataframe to put it in another dataframe in R?
19 months ago by Amr ▴ 160
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703
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Comment: Comment: How to take data from dataframe to put it in another dataframe in R?
19 months ago by Amr ▴ 160
4
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4
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703
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How to take data from dataframe to put it in another dataframe in R?
dataframe R
19 months ago by Amr ▴ 160
5
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9
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1.4k
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Convert Gene Ensemble IDs to Gene Symbols on R
Ensemble R Gene-Symbols biomart
updated 10 months ago by 43k • written 19 months ago by ▴ 160
0
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1
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1.4k
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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
19 months ago by Amr ▴ 160
0
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1
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1.4k
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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
19 months ago by Amr ▴ 160
1
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1
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1.4k
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Comment: Comment: Convert Gene Ensemble IDs to Gene Symbols on R
updated 19 months ago by 142k • written 19 months ago by ▴ 160
0
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1
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472
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Depending on which counts number, the genes are overexpressed either up or down regulated in GSEA ?
gene GSEA geneset
updated 19 months ago by ★ 1.8k • written 19 months ago by ▴ 160
7
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2
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6.8k
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How to use biomart on R to convert Ensembl Gene IDs to Symbols?
IDs R biomart Ensembl Symbols
updated 19 months ago by ★ 2.4k • written 19 months ago by ▴ 160
2
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2
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605
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Why the number of genes decreased after dds (DESeqDataSetFromMatrix)?
R DESeq2
updated 6 months ago by 43k • written 19 months ago by ▴ 160
0
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3
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675
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Why it is recommended to run samples from all groups together while performing DESeq although the design variables are not used when estimating the s…
DESeq2 GSEA R DEG
updated 19 months ago by 100k • written 19 months ago by ▴ 160
0
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0
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675
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Comment: Comment: Why it is recommended to run samples from all groups together while performing D
19 months ago by Amr ▴ 160
2
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3
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706
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How to shade columns for dataframe in ggplot that has 2 dataframes?
ggplot2 R
updated 19 months ago by 11k • written 19 months ago by ▴ 160
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