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146
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Machine Learning Classifiers on TCGA dataset(tpm_unstrand) gene expression data set
machine
RNASeq
python
learning
9 days ago by
Jakpa
▴ 50
2
votes
1
reply
261
views
How to iterate over Pandas Data frame and replace multiple rows
DataFrame
Python
Pandas
9 weeks ago by
Jakpa
▴ 50
2
votes
0
replies
261
views
Answer:
Answer: How to iterate over Pandas Data frame and replace multiple rows
9 weeks ago by
Jakpa
▴ 50
0
votes
0
replies
317
views
Comment:
Comment: ColData and rowData Sample_id mapping from TCGA database
9 weeks ago by
Jakpa
▴ 50
0
votes
3
replies
317
views
ColData and rowData Sample_id mapping from TCGA database
GeneExpression
R
TCGA
9 weeks ago by
Jakpa
▴ 50
0
votes
0
replies
212
views
Comment:
Comment: matrix' .'array'` to Matrix in R
11 weeks ago by
Jakpa
▴ 50
0
votes
0
replies
212
views
Comment:
Comment: matrix' .'array'` to Matrix in R
11 weeks ago by
Jakpa
▴ 50
0
votes
3
replies
212
views
matrix' .'array'` to Matrix in R
dataframe
Matrix
geneexpression
R
11 weeks ago by
Jakpa
▴ 50
0
votes
0
replies
516
views
Comment:
Comment: Synthetically valid name error in "MakeContracts" in Limma
3 months ago by
Jakpa
▴ 50
0
votes
1
reply
516
views
Comment:
Comment: Synthetically valid name error in "MakeContracts" in Limma
3 months ago by
Jakpa
▴ 50
4
votes
6
replies
516
views
Synthetically valid name error in "MakeContracts" in Limma
Matrix
limma
GeneExpression
R
3 months ago by
Jakpa
▴ 50
0
votes
1
reply
516
views
Comment:
Comment: Synthetically valid name error in "MakeContracts" in Limma
3 months ago by
Jakpa
▴ 50
0
votes
0
replies
400
views
Comment:
Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
updated 3 months ago by
rpolicastro
11k • written 3 months ago by
Jakpa
▴ 50
0
votes
0
replies
400
views
Comment:
Comment: NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
3 months ago by
Jakpa
▴ 50
0
votes
4
replies
400
views
NAs using org.Hs.eg.db for Ensembl ID to Gene Symbol annotation
RNASeq
annotation
expression
Gene
R
updated 3 months ago by
rpolicastro
11k • written 3 months ago by
Jakpa
▴ 50
0
votes
1
reply
402
views
Comment:
Comment: Esembl geneID with Characters
3 months ago by
Jakpa
▴ 50
1
vote
3
replies
402
views
Esembl geneID with Characters
Esembl
annotation
GeneExpression
R
updated 3 months ago by
i.sudbery
16k • written 3 months ago by
Jakpa
▴ 50
0
votes
1
reply
1.8k
views
Comment:
Comment: need some help on how to use DESeq2 for TCGA data
3 months ago by
Jakpa
▴ 50
2
votes
1
reply
231
views
GEO data sample information error
Expression
Gene
Microarray
GEO
R
updated 3 months ago by
ATpoint
68k • written 3 months ago by
Jakpa
▴ 50
0
votes
1
reply
1.8k
views
Comment:
Comment: need some help on how to use DESeq2 for TCGA data
3 months ago by
Jakpa
▴ 50
1
vote
1
reply
260
views
Microarray Database
microarray
gene-expression
RNA
updated 8 weeks ago by
Ram
38k • written 3 months ago by
Jakpa
▴ 50
0
votes
0
replies
504
views
Comment:
Comment: How to download Gene expression data and associate clinical data from TCGA
3 months ago by
Jakpa
▴ 50
0
votes
3
replies
504
views
How to download Gene expression data and associate clinical data from TCGA
RNA-Seq
Gene-expression
TCGA
3 months ago by
Jakpa
▴ 50
0
votes
0
replies
251
views
plots of genomic annotations together with fictitious RNA binding protein data with python
python
annotation
matplotlib
19 months ago by
Jakpa
▴ 50
1
vote
0
replies
5.1k
views
Comment:
C: ColSideColors' must be a character vector of length ncol(x)
2.1 years ago by
Jakpa
▴ 50
0
votes
1
reply
5.1k
views
Comment:
C: ColSideColors' must be a character vector of length ncol(x)
2.1 years ago by
Jakpa
▴ 50
3
votes
7
replies
5.1k
views
ColSideColors' must be a character vector of length ncol(x)
R
heatmap.2
differential gene expression
2.1 years ago by
Jakpa
▴ 50
0
votes
0
replies
5.1k
views
Comment:
A: ColSideColors' must be a character vector of length ncol(x)
2.1 years ago by
Jakpa
▴ 50
0
votes
1
reply
5.1k
views
Comment:
C: ColSideColors' must be a character vector of length ncol(x)
2.1 years ago by
Jakpa
▴ 50
0
votes
0
replies
673
views
Comment:
C: Error in opening fastq.gz file
2.1 years ago by
Jakpa
▴ 50
0
votes
1
reply
673
views
Comment:
C: Error in opening fastq.gz file
2.1 years ago by
Jakpa
▴ 50
1
vote
5
replies
673
views
Error in opening fastq.gz file
Fastq.gz
linux
flexbar adapter atarimming
updated 2.1 years ago by
Ram
38k • written 2.1 years ago by
Jakpa
▴ 50
0
votes
0
replies
947
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.1 years ago by
Jakpa
▴ 50
0
votes
0
replies
947
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.1 years ago by
Jakpa
▴ 50
0
votes
0
replies
947
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.1 years ago by
Jakpa
▴ 50
0
votes
2
replies
947
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.1 years ago by
Jakpa
▴ 50
0
votes
0
replies
947
views
Comment:
C: Error massage when instantiating DEseq Dataset
2.1 years ago by
Jakpa
▴ 50
0
votes
8
replies
947
views
Error massage when instantiating DEseq Dataset
differential Expression
sizefactors
DESeq
R
updated 2.1 years ago by
ATpoint
68k • written 2.1 years ago by
Jakpa
▴ 50
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