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10
votes
6
replies
4.4k
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Limma: Extracting results when the global option of the decideTests is used
R
limma
updated 2.4 years ago by
1769mkc
★ 1.2k • written 3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
6.4k
views
Comment:
Comment: Pheatmap/Complexheatmap: making a continuous color scale with NAs
3.7 years ago by
Ridha
▴ 130
3
votes
2
replies
6.4k
views
Pheatmap/Complexheatmap: making a continuous color scale with NAs
clustering
pathways
complexheatmap
pheatmap
3.7 years ago by
Ridha
▴ 130
0
votes
1
reply
2.5k
views
Comment:
Comment: Cannot resize rowlabels in aheatmap
3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
1.6k
views
Comment:
Comment: Survival analysis
3.7 years ago by
Ridha
▴ 130
0
votes
1
reply
2.0k
views
Answer:
Answer: Gene ID conversion for pathway enrichment analysis of differentially expressed g
3.7 years ago by
Ridha
▴ 130
2
votes
2
replies
2.2k
views
Visualizing overlap between gene sets in R using circos plots
plot
multiplegenesets
gene
circos
R
updated 2.8 years ago by
behdad.afzali
• 0 • written 3.7 years ago by
Ridha
▴ 130
2
votes
1
reply
4.4k
views
Comment:
Comment: Limma: Extracting results when the global option of the decideTests is used
3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
2.0k
views
Comment:
Comment: Alternatives to cytoscape for integrative analysis of Rna-seq data
3.7 years ago by
Ridha
▴ 130
2
votes
1
reply
2.0k
views
Answer:
Answer: Alternatives to cytoscape for integrative analysis of Rna-seq data
3.7 years ago by
Ridha
▴ 130
0
votes
1
reply
4.4k
views
Comment:
Comment: Limma: Extracting differentially expressed genes identified with the global meth
3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
7.0k
views
Comment:
Comment: Differential protein/biomarker expression using limma: is that possible?
3.7 years ago by
Ridha
▴ 130
8
votes
8
replies
7.0k
views
Differential protein/biomarker expression using limma: is that possible?
RNA-Seq
NPX
LIMMA
PROTEOMICS
microarray
updated 3.5 years ago by
tesic93
▴ 40 • written 3.7 years ago by
Ridha
▴ 130
2
votes
1
reply
5.9k
views
Answer:
A: How to get fastq files of SRA in Galaxy
3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
5.9k
views
Comment:
C: How to get fastq files of SRA in Galaxy
3.7 years ago by
Ridha
▴ 130
0
votes
1
reply
7.0k
views
Comment:
C: Differential protein/biomarker expression using limma: is that possible?
3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
7.0k
views
Comment:
C: Differential protein/biomarker expression using limma: is that possible?
3.7 years ago by
Ridha
▴ 130
0
votes
0
replies
1.0k
views
Analyzing RNA-Seq with duplicate ensembl ids using DESeq2: should tximport be used?
RNA-Seq
alignment
R
3.8 years ago by
Ridha
▴ 130
0
votes
1
reply
1.4k
views
Comment:
C: Analyzing processed RNA-seq data: is this TMM normalized?
3.8 years ago by
Ridha
▴ 130
0
votes
3
replies
1.4k
views
Analyzing processed RNA-seq data: is this TMM normalized?
rna-seq
r
updated 3.8 years ago by
Kevin Blighe
88k • written 3.8 years ago by
Ridha
▴ 130
3
votes
3
replies
1.3k
views
Annotating gene names: Why having different number of ensembl IDs using biomaRt
rna-seq
R
gene
updated 3.8 years ago by
jared.andrews07
★ 18k • written 3.8 years ago by
Ridha
▴ 130
0
votes
1
reply
1.4k
views
Comment:
C: Design in DESeq2: measruing effects of treatment while adjusting for sample type
3.8 years ago by
Ridha
▴ 130
0
votes
1
reply
1.4k
views
Comment:
C: Design in DESeq2: measruing effects of treatment while adjusting for sample type
3.8 years ago by
Ridha
▴ 130
2
votes
7
replies
1.4k
views
Design in DESeq2: measruing effects of treatment while adjusting for sample type
RNA-Seq
R
3.8 years ago by
Ridha
▴ 130
0
votes
0
replies
1.6k
views
Comment:
A: RNA-seq using DESeq2: quality control of replicates using PCA and heatmaps
3.9 years ago by
Ridha
▴ 130
2
votes
4
replies
1.6k
views
RNA-seq using DESeq2: quality control of replicates using PCA and heatmaps
rna-seq
R
3.9 years ago by
Ridha
▴ 130
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