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10
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6
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Limma: Extracting results when the global option of the decideTests is used
R limma
updated 2.2 years ago by ★ 1.2k • written 3.5 years ago by ▴ 130
0
votes
0
replies
6.2k
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Comment: Comment: Pheatmap/Complexheatmap: making a continuous color scale with NAs
3.5 years ago by Ridha ▴ 130
3
votes
2
replies
6.2k
views
Pheatmap/Complexheatmap: making a continuous color scale with NAs
clustering pathways complexheatmap pheatmap
3.5 years ago by Ridha ▴ 130
0
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1
reply
2.5k
views
Comment: Comment: Cannot resize rowlabels in aheatmap
3.5 years ago by Ridha ▴ 130
0
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0
replies
1.6k
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Comment: Comment: Survival analysis
3.5 years ago by Ridha ▴ 130
0
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1
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2.0k
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Answer: Answer: Gene ID conversion for pathway enrichment analysis of differentially expressed g
3.5 years ago by Ridha ▴ 130
2
votes
2
replies
2.2k
views
Visualizing overlap between gene sets in R using circos plots
plot multiplegenesets gene circos R
updated 2.7 years ago by • 0 • written 3.5 years ago by ▴ 130
2
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1
reply
4.3k
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Comment: Comment: Limma: Extracting results when the global option of the decideTests is used
3.5 years ago by Ridha ▴ 130
0
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0
replies
1.9k
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Comment: Comment: Alternatives to cytoscape for integrative analysis of Rna-seq data
3.5 years ago by Ridha ▴ 130
2
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1
reply
1.9k
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Answer: Answer: Alternatives to cytoscape for integrative analysis of Rna-seq data
3.5 years ago by Ridha ▴ 130
0
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1
reply
4.3k
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Comment: Comment: Limma: Extracting differentially expressed genes identified with the global meth
3.5 years ago by Ridha ▴ 130
0
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0
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6.7k
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Comment: Comment: Differential protein/biomarker expression using limma: is that possible?
3.5 years ago by Ridha ▴ 130
8
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8
replies
6.7k
views
Differential protein/biomarker expression using limma: is that possible?
RNA-Seq NPX LIMMA PROTEOMICS microarray
updated 3.3 years ago by ▴ 40 • written 3.6 years ago by ▴ 130
2
votes
1
reply
5.6k
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Answer: A: How to get fastq files of SRA in Galaxy
3.6 years ago by Ridha ▴ 130
0
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0
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5.6k
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Comment: C: How to get fastq files of SRA in Galaxy
3.6 years ago by Ridha ▴ 130
0
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1
reply
6.7k
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Comment: C: Differential protein/biomarker expression using limma: is that possible?
3.6 years ago by Ridha ▴ 130
0
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0
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6.7k
views
Comment: C: Differential protein/biomarker expression using limma: is that possible?
3.6 years ago by Ridha ▴ 130
0
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0
replies
1.0k
views
Analyzing RNA-Seq with duplicate ensembl ids using DESeq2: should tximport be used?
RNA-Seq alignment R
3.6 years ago by Ridha ▴ 130
0
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1
reply
1.4k
views
Comment: C: Analyzing processed RNA-seq data: is this TMM normalized?
3.6 years ago by Ridha ▴ 130
0
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3
replies
1.4k
views
Analyzing processed RNA-seq data: is this TMM normalized?
rna-seq r
updated 3.7 years ago by 88k • written 3.7 years ago by ▴ 130
3
votes
3
replies
1.2k
views
Annotating gene names: Why having different number of ensembl IDs using biomaRt
rna-seq R gene
updated 3.7 years ago by ★ 17k • written 3.7 years ago by ▴ 130
0
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1
reply
1.4k
views
Comment: C: Design in DESeq2: measruing effects of treatment while adjusting for sample type
3.7 years ago by Ridha ▴ 130
0
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1
reply
1.4k
views
Comment: C: Design in DESeq2: measruing effects of treatment while adjusting for sample type
3.7 years ago by Ridha ▴ 130
2
votes
7
replies
1.4k
views
Design in DESeq2: measruing effects of treatment while adjusting for sample type
RNA-Seq R
3.7 years ago by Ridha ▴ 130
2
votes
4
replies
1.5k
views
RNA-seq using DESeq2: quality control of replicates using PCA and heatmaps
rna-seq R
3.7 years ago by Ridha ▴ 130
0
votes
0
replies
1.5k
views
Comment: A: RNA-seq using DESeq2: quality control of replicates using PCA and heatmaps
3.7 years ago by Ridha ▴ 130
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