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questions
0
votes
3
replies
430
views
IGV read color ,what is inferred insert size and expected insert size mean?
IGV
updated 10 weeks ago by
GenoMax
142k • written 10 weeks ago by
Tao
▴ 40
2
votes
2
replies
889
views
How to iterate through paired-end reads in pysam?
bam
sam
pysam
samtools
updated 13 months ago by
Ram
43k • written 19 months ago by
Tao
▴ 40
0
votes
1
reply
500
views
I have two different libaries which were sequenced, How should I compare their library diversity?
bam
sam
updated 13 months ago by
Ram
43k • written 2.0 years ago by
Tao
▴ 40
2
votes
4
replies
873
views
What's the difference between library diversity and unique molecules?
bam
sam
updated 13 months ago by
Ram
43k • written 2.0 years ago by
Tao
▴ 40
0
votes
2
replies
537
views
CollectHsMetrics (Picard) HS_LIBRARY_SIZE is empty
picard-tools
Picard
updated 10 months ago by
Ram
43k • written 2.1 years ago by
Tao
▴ 40
0
votes
1
reply
477
views
error of install gencore about libgcc-ng
gencore
mamba
conda
updated 2.1 years ago by
rpolicastro
13k • written 2.1 years ago by
Tao
▴ 40
2
votes
1
reply
1.2k
views
What's the difference between bait coverage and target coverage of picard CollectHsMetrics?
picard
updated 2.1 years ago by
Pierre Lindenbaum
161k • written 2.1 years ago by
Tao
▴ 40
0
votes
1
reply
391
views
How to randomly extract pair reads from bam file?
sam
bam
updated 2.1 years ago by
Pierre Lindenbaum
161k • written 2.1 years ago by
Tao
▴ 40
0
votes
2
replies
1.7k
views
bcl2fastq error
bcl2fastq
updated 2.3 years ago by
cpad0112
21k • written 2.3 years ago by
Tao
▴ 40
0
votes
2
replies
851
views
are there some software to compute depth?
bam
sam
depth
updated 13 months ago by
Ram
43k • written 2.4 years ago by
Tao
▴ 40
1
vote
1
reply
611
views
What is the principle of samtools depth?
samtools
depth
updated 11 months ago by
Ram
43k • written 2.4 years ago by
Tao
▴ 40
5
votes
8
replies
1.9k
views
why those reads don't contain 0x2
bam
sam
updated 13 months ago by
Ram
43k • written 2.5 years ago by
Tao
▴ 40
2
votes
3
replies
1.5k
views
what is bam format file flag 0x2 mean?
bam
flag
sam
updated 22 months ago by
Wang Cong
▴ 10 • written 2.6 years ago by
Tao
▴ 40
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