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Help doing differential expression analysis -experimental design and gProfiler TF interpretation-
gProfiler mRNA Differential-expression TCGA
updated 4 months ago by • 0 • written 5 months ago by ▴ 40
1
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1
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787
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Answer: Answer: Problem while working with sequenza - Chromosomes out of order
7 months ago by Camilo Andres ▴ 40
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4
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787
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Problem while working with sequenza - Chromosomes out of order
sequenza NGS picard samtools bam
7 months ago by Camilo Andres ▴ 40
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1
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787
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Comment: Comment: Problem while working with sequenza - Chromosomes out of order
7 months ago by Camilo Andres ▴ 40
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0
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795
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Comment: Comment: Error using sequenza-utils with WES
7 months ago by Camilo Andres ▴ 40
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1
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795
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Comment: Comment: Error using sequenza-utils with WES
7 months ago by Camilo Andres ▴ 40
0
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4
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795
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Error using sequenza-utils with WES
WES NGS Sequenza Sequenza-utils
7 months ago by Camilo Andres ▴ 40
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1.2k
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Comment: Comment: How to deal with duplicated gene IDs in TCGA RNA expression data?
11 months ago by Camilo Andres ▴ 40
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7
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1.2k
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How to deal with duplicated gene IDs in TCGA RNA expression data?
TCGA Expression mRNA
updated 11 months ago by 4.2k • written 11 months ago by ▴ 40
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1.2k
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Comment: Comment: How to deal with duplicated gene IDs in TCGA RNA expression data?
11 months ago by Camilo Andres ▴ 40
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778
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Comment: Comment: Using t test to compare z-scores from RNA expression data
11 months ago by Camilo Andres ▴ 40
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1
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778
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Comment: Comment: Using t test to compare z-scores from RNA expression data
11 months ago by Camilo Andres ▴ 40
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5
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778
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Using t test to compare z-scores from RNA expression data
expression Statistics Z-Score RNA
11 months ago by Camilo Andres ▴ 40
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0
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352
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Comparison between z-scores of protein and mRNA levels
expression Statistics
11 months ago by Camilo Andres ▴ 40
1
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1
reply
598
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Biallelicly affected genes in pan cancer tcga data using cbioportal
cBioportal Biallelic TCGA
updated 15 months ago by ▴ 110 • written 15 months ago by ▴ 40
2
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1
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650
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cBioportal: Mutations in the database don't appear in the portal
cbioportal
updated 15 months ago by ▴ 110 • written 15 months ago by ▴ 40
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0
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301
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How to compare multiple groups with count data?
statistics
19 months ago by Camilo Andres ▴ 40
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1
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418
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How can I transform a three column data frame into a binary-table in R?
rstudio
updated 22 months ago by ▴ 830 • written 22 months ago by ▴ 40
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598
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Comment: Comment: Pathway based analysis of mutated genes
23 months ago by Camilo Andres ▴ 40
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2
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598
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Pathway based analysis of mutated genes
rstudio Cytoscape analysis Mutation
23 months ago by Camilo Andres ▴ 40
1
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1
reply
535
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Fisher test in R to compare percentages of three databases
test fisher R statistics
updated 2.3 years ago by ★ 2.9k • written 2.3 years ago by ▴ 40
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0
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553
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Two questions about correlation calculation and plotting in R
correlation rstudio spearman pheatmap
2.5 years ago by Camilo Andres ▴ 40
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0
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459
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How to compare and group samples according to common mutated genes in R
variants rstudio somatic samples grouping
2.6 years ago by Camilo Andres ▴ 40
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0
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796
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Comment: Comment: Doubts with Stacked barplot using R ggplot2
2.7 years ago by Camilo Andres ▴ 40
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2
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796
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Doubts with Stacked barplot using R ggplot2
stacked rstudio ggplot2 barplot
2.7 years ago by Camilo Andres ▴ 40
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