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Help doing differential expression analysis -experimental design and gProfiler TF interpretation-
gProfiler mRNA Differential-expression TCGA
updated 23 months ago by • 0 • written 23 months ago by ▴ 40
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Answer: Answer: Problem while working with sequenza - Chromosomes out of order
2.1 years ago by Camilo Andres ▴ 40
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4
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1.8k
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Problem while working with sequenza - Chromosomes out of order
sequenza NGS picard samtools bam
2.1 years ago by Camilo Andres ▴ 40
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Comment: Comment: Problem while working with sequenza - Chromosomes out of order
2.2 years ago by Camilo Andres ▴ 40
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1.6k
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Comment: Comment: Error using sequenza-utils with WES
2.2 years ago by Camilo Andres ▴ 40
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Comment: Comment: Error using sequenza-utils with WES
2.2 years ago by Camilo Andres ▴ 40
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4
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1.6k
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Error using sequenza-utils with WES
WES NGS Sequenza Sequenza-utils
2.2 years ago by Camilo Andres ▴ 40
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2.3k
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Comment: Comment: How to deal with duplicated gene IDs in TCGA RNA expression data?
2.4 years ago by Camilo Andres ▴ 40
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7
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2.3k
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How to deal with duplicated gene IDs in TCGA RNA expression data?
TCGA Expression mRNA
updated 2.4 years ago by 4.8k • written 2.4 years ago by ▴ 40
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Comment: Comment: How to deal with duplicated gene IDs in TCGA RNA expression data?
2.4 years ago by Camilo Andres ▴ 40
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1.6k
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Comment: Comment: Using t test to compare z-scores from RNA expression data
2.4 years ago by Camilo Andres ▴ 40
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1.6k
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Comment: Comment: Using t test to compare z-scores from RNA expression data
2.4 years ago by Camilo Andres ▴ 40
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5
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1.6k
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Using t test to compare z-scores from RNA expression data
expression Statistics Z-Score RNA
2.4 years ago by Camilo Andres ▴ 40
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627
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Comparison between z-scores of protein and mRNA levels
expression Statistics
2.4 years ago by Camilo Andres ▴ 40
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1.1k
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Biallelicly affected genes in pan cancer tcga data using cbioportal
cBioportal Biallelic TCGA
updated 2.7 years ago by ▴ 120 • written 2.8 years ago by ▴ 40
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1.4k
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cBioportal: Mutations in the database don't appear in the portal
cbioportal
updated 2.7 years ago by ▴ 120 • written 2.8 years ago by ▴ 40
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497
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How to compare multiple groups with count data?
statistics
3.1 years ago by Camilo Andres ▴ 40
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1
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728
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How can I transform a three column data frame into a binary-table in R?
rstudio
updated 3.3 years ago by ▴ 840 • written 3.3 years ago by ▴ 40
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959
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Comment: Comment: Pathway based analysis of mutated genes
3.5 years ago by Camilo Andres ▴ 40
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2
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959
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Pathway based analysis of mutated genes
rstudio Cytoscape analysis Mutation
3.5 years ago by Camilo Andres ▴ 40
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1
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915
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Fisher test in R to compare percentages of three databases
test fisher R statistics
updated 3.8 years ago by ★ 3.0k • written 3.8 years ago by ▴ 40
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0
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798
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Two questions about correlation calculation and plotting in R
correlation rstudio spearman pheatmap
4.0 years ago by Camilo Andres ▴ 40
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0
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705
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How to compare and group samples according to common mutated genes in R
variants rstudio somatic samples grouping
4.1 years ago by Camilo Andres ▴ 40
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0
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1.2k
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Comment: Comment: Doubts with Stacked barplot using R ggplot2
4.2 years ago by Camilo Andres ▴ 40
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2
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1.2k
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Doubts with Stacked barplot using R ggplot2
stacked rstudio ggplot2 barplot
4.2 years ago by Camilo Andres ▴ 40
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