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1
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513
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Python tools for gene annotation, ontology & gene set analysis
gene ontology annotation databases single-cell
2.2 years ago by PianoEntropy ▴ 70
0
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0
replies
602
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(scRNAseq) Fitting RNA splicing dynamics with scvelo gives wrong results
RNA-seq single-cell scvelo splicing
2.5 years ago by PianoEntropy ▴ 70
6
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2
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6.7k
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Tools to generate spliced/unspliced counts
velocyto single-cell splicing RNA-seq scvelo
2.8 years ago by PianoEntropy ▴ 70
0
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0
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5.3k
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Comment: Comment: scvelo vs velocyto
2.8 years ago by PianoEntropy ▴ 70
0
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1
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1.2k
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Comment: Comment: Difference between CellRanger reference genome and Ensembl/UCSC?
2.8 years ago by PianoEntropy ▴ 70
1
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3
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1.2k
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Difference between CellRanger reference genome and Ensembl/UCSC?
cellranger single-cell RNA-seq alignment
updated 2.8 years ago by 141k • written 2.8 years ago by ▴ 70
0
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3
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2.1k
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STARsolo --EmptyDrops_CR parameters
RNA-seq alignment STAR
updated 2.2 years ago by • 0 • written 2.8 years ago by ▴ 70
4
votes
4
replies
1.5k
views
Generate QC report for STARsolo (html)
quality RNA-seq control STAR
updated 2.8 years ago by ★ 2.2k • written 2.8 years ago by ▴ 70
0
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0
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1.5k
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Comment: Comment: Generate QC report for STARsolo (html)
2.8 years ago by PianoEntropy ▴ 70
2
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0
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6.1k
views
Comment: Comment: Run STAR on .fastq files I1, R1 and R2
2.9 years ago by PianoEntropy ▴ 70
9
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2
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6.1k
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Run STAR on .fastq files I1, R1 and R2
RNA-seq alignment STAR
2.9 years ago by PianoEntropy ▴ 70
4
votes
1
reply
1.1k
views
Cellranger alignment options / parameters
Cellranger Alignment
updated 2.9 years ago by ★ 16k • written 2.9 years ago by ▴ 70
0
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2
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4.3k
views
Comment: Comment: Merging FASTQ files with Cellranger
2.9 years ago by PianoEntropy ▴ 70
3
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8
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4.3k
views
6 follow
Merging FASTQ files with Cellranger
Cellranger Merging
updated 12 months ago by • 0 • written 2.9 years ago by ▴ 70
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