I am completely new for this kind of tasks. I have data like this,
>in0 GATCCTCGAAGTTACACGGG >in1 TACGTCGACGTCAATCCGGG >in2 TACACGGGCCGCTCCTGGGC >in3 ACGGGGTACTACGAGACGCG >in4 AGGGGGAATGTGGTCCACAT >in5 TCCACATGGCTTGCTCCTGA >in6 CTTGACGTTATGAATTTCGC
and so on..I need to assemble these short reads. I want to use perl for this. I just need a pseudo code on how to do this or direct me to a good resource. At the end I need a single string containing consensus sequence.