Question: pathway database KEGG and REACTOME
0
gravatar for mittu1602
4.6 years ago by
mittu1602180
India
mittu1602180 wrote:

diffrence between kegg and reactome? in analysis? advantages and disadvantages?

 

 

pathway database • 2.8k views
ADD COMMENTlink modified 4.5 years ago by onspotproductions140 • written 4.6 years ago by mittu1602180

For what I have used it for I have found it to have more information as compared to reactome.

ADD REPLYlink written 4.5 years ago by onspotproductions140

It's time to give up KEGG since updated version can not be accessed publicly.

ADD REPLYlink written 20 months ago by Shicheng Guo8.2k
0
gravatar for onspotproductions
4.5 years ago by
United States
onspotproductions140 wrote:

KEGG I have found to be more difficult to run enrichment analysis on, but I have found at least for my projects it contains a good deal more data than reactome. Reactome has a much better UI howeverthan KEGG and its built in search is definitely better.

ADD COMMENTlink written 4.5 years ago by onspotproductions140

Hi,

do you mean that KEGG is better and more exact than REACTME ???

ADD REPLYlink modified 6 months ago by RamRS27k • written 4.5 years ago by winter_li60

Both KEGG and Reactome covers same number of genes ( example for human ~7000). The difference is KEGG has more broad term and Reactome has similar terms but as multiple detailed entries (splited terms for same entry from KEGG) .

This is the difference I found so far. Please correct me if I am wrong.

ADD REPLYlink written 4.5 years ago by EagleEye6.6k
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