pathway database KEGG and REACTOME
1
0
Entering edit mode
6.1 years ago
mittu1602 ▴ 180

diffrence between kegg and reactome? in analysis? advantages and disadvantages?

 

 

pathway database • 4.5k views
ADD COMMENT
0
Entering edit mode

For what I have used it for I have found it to have more information as compared to reactome.

ADD REPLY
0
Entering edit mode

It's time to give up KEGG since updated version can not be accessed publicly.

ADD REPLY
0
Entering edit mode
6.0 years ago

KEGG I have found to be more difficult to run enrichment analysis on, but I have found at least for my projects it contains a good deal more data than reactome. Reactome has a much better UI howeverthan KEGG and its built in search is definitely better.

ADD COMMENT
0
Entering edit mode

Hi,

do you mean that KEGG is better and more exact than REACTME ???

ADD REPLY
0
Entering edit mode

Both KEGG and Reactome covers same number of genes ( example for human ~7000). The difference is KEGG has more broad term and Reactome has similar terms but as multiple detailed entries (splited terms for same entry from KEGG) .

This is the difference I found so far. Please correct me if I am wrong.

ADD REPLY

Login before adding your answer.

Traffic: 2309 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6