Question: how to detect repetitive motifs in gene?
3.1 years ago by
harold.smith.tarheel • 4.4k
harold.smith.tarheel • 4.4k wrote:
For perfect repeats, a kmer counter with sufficiently small k would work. For imperfect repeats, BLAST alignment of gene against itself can be useful (and dot matrix display provides a tool for visualizing the positions and numbers of repeats).
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