hi everyone, Can we perform a genome alignment in MAUVE without having a reference genome ?
Since you get to pick the genomes you want to align, yes.
Also see this post. it may be useful.
Multiple whole genome alignment
Yes you can chose whatever genomes you need , so no reference will work, But
Have a look at this Any Software To Do Multiple Genome Alignment For Bacterial Genomes?
it will give you more info to achieve what you need
yes you can!!! you don't need a reference
Login before adding your answer.
Use of this site constitutes acceptance of our User Agreement and Privacy