Question: Downstream applications of Differential transcript expression
1
gravatar for rmf
2.3 years ago by
rmf750
rmf750 wrote:

I am looking for examples of possible downstream applications/methods for Differential transcript expression. For genes, I would go for enrichment analysis, GO analysis, pathway analysis etc.

I have a list of differentially expressed transcripts. What then?

rna-seq • 874 views
ADD COMMENTlink modified 2.3 years ago by theobroma221.1k • written 2.3 years ago by rmf750
1
gravatar for theobroma22
2.3 years ago by
theobroma221.1k
theobroma221.1k wrote:

SPIA: Signalling Pathway Impact Analysis

ADD COMMENTlink written 2.3 years ago by theobroma221.1k
0
gravatar for h.mon
2.3 years ago by
h.mon28k
Brazil
h.mon28k wrote:

See these BioConductor Workflows:

https://www.bioconductor.org/help/workflows/RNAseq123/

https://www.bioconductor.org/help/workflows/RnaSeqGeneEdgeRQL/

ADD COMMENTlink written 2.3 years ago by h.mon28k
0
gravatar for EagleEye
2.3 years ago by
EagleEye6.5k
Sweden
EagleEye6.5k wrote:

GeneSCF

ADD COMMENTlink written 2.3 years ago by EagleEye6.5k
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