Question: What is Read Group platform??
0
gravatar for 2012secondseason
13 days ago by
2012secondseason10 wrote:

Hello. In tool 'AddOrReplaceGroups''s arguments - --RGPL, --RGLB, --RGPU, --RGSM, what do they mean by each one?

In case of. RGBL, should i set a name of read group library now or I should fill in exsisting name?

And I wanna know exactly what other things mean. Please explain in detail. Thank you in advance.

tool readgroup • 116 views
ADD COMMENTlink modified 12 days ago by rse40 • written 13 days ago by 2012secondseason10
1

Hi, I have multiple read groups in my bam file. I want to replace one read group and not the other. How should i proceed? Picard tools would replace all ? Will linux commands work?

ADD REPLYlink written 12 days ago by rse40
1

ask this as a new question please. And please, take some time to validate all your previous questions.

If an answer was helpful you should upvote it, if the answer resolved your question you should mark it as accepted.

Upvote|Bookmark|Accept

ADD REPLYlink written 12 days ago by Pierre Lindenbaum106k

Ok sure. Thanks a lot.

ADD REPLYlink written 11 days ago by rse40

please validate or comment all your previous questions.

ADD REPLYlink written 13 days ago by Pierre Lindenbaum106k
3
gravatar for jean.elbers
13 days ago by
jean.elbers160
jean.elbers160 wrote:

See the following for more guidance https://software.broadinstitute.org/gatk/documentation/article.php?id=6472

ADD COMMENTlink written 13 days ago by jean.elbers160

Nice. Thank you so much!

ADD REPLYlink written 13 days ago by 2012secondseason10
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