I'm performing GWAS with MLM approach. I'm wondering which multiple testing correction method i have to apply to my MLM resulted p-values?
it would help if you could elaborate on why Bonferroni (over other methods) is the method-of-choice here. This publication might be worth reading.
This one is also interesting:
A general method for controlling the genome-wide type I error rate in linkage and association mapping experiments in plants
Just out of curiosity, does the statistical method (MLM in this case) matter on which type of correction to use?
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