We are trying to enhance a present draft genome of an species of Planaria. The size of the present draft genome is about 1.52Gbp. We used Arcs to enhance our draft genome, the result is almost good but only the scaffolds are augmented and the total size of the draft genome is not changed. It wasn't unexpected for us, because the Arcs uses 10X data in order to re-scaffold the genome and does not insert 10X reads in the genome string. It seems that we need another tool.
Does anybody know any tool getting a draft genome and 10X reads and make the total size of the genome longer, not only making bigger scaffolds?
thanks for any response