I have been working on my transcriptome assembly and now it is time to start doing functional annotation.
I have read that a way to do it is using SWISSPROT. The command that I have found is something like:
blastx -db ~/shared_ro/dbs/sprot.mini.pep -query Trinity.fasta -num_threads 2 \ -max_target_seqs 1 -outfmt 6 -evalue 1e-5 \ > swissprot.blastx.outfmt6
However, and probably due to I am not an expert in this field, I don't know where to find the sprot.mini.pep file. I guess it is the database that SWISSPROT uses (or maybe not). But I don't know if I need to download it or it already installed when I installed Trinity since I did my transcript whit Trinity and I am following the commands in here: https://github.com/trinityrnaseq/BerlinTrinityWorkshop2018/wiki/functional_annotation
Thank you so much in advance