I have multiple VCF files (they are not multiple-sample VCF) and I just looked the genotypes and I saw there are 4 genotypes for each variant like: 0/0, 0/1, 1/1, ./. . The last three genotypes are clear to me, but I don`t understand why we have 'Hom_ref genotype' in the VCF files? And shall I ignore them?
Question: why there is 0/0 genotyp in VCF file?
7 days ago by
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