Question: how to create a scatter plot as shown
0
gravatar for kanwarjag
11 months ago by
kanwarjag1.1k
United States
kanwarjag1.1k wrote:

I have following columns: 1.genes expressed in both protein and RNAseq (Log2FC protein and RNAseq) 2. genes expressed in RNAseq (log2 FC RNAseq) 3.genes expressed in protein (log2FC protein) I cold not figure out how we have two axis of log2FC RNAseq vs log2FC protein and then plot all the rest of the values. A similar figure has been reported @ https://www.nature.com/articles/s41598-017-09335-6/figures/2 and has been uploaded here

It may be a simple solution but I cannot figure it out. Thanks

enter image description here

question about figure • 369 views
ADD COMMENTlink modified 11 months ago by h.mon31k • written 11 months ago by kanwarjag1.1k
3

Read up on ggplot, log-linear and log-log plots, and regression.

ADD REPLYlink modified 11 months ago • written 11 months ago by Alex Reynolds31k
1

How to add images to a Biostars post

ADD REPLYlink written 11 months ago by WouterDeCoster44k
1

without any usable dataset, it's very difficult to provide an answer...anyway, if you know something about R, you can start by looking here: https://www.r-graph-gallery.com/scatterplot.html

ADD REPLYlink written 11 months ago by gabrit90
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1528 users visited in the last hour