I have a annotated my VCF using SnpEff and now I want to convert INFO column into different columns. Can anybody suggest any tool or command?
an example of output is needed
Here is the example :
that's the input. we need the output
That looks like an INFO column with SnpEff annotation to me.
mandar.bedse Which output format (columns/structure) do you want to get from that? You'll have to be more specific.
Do you mean you want to have the output from SNPEff to be converted into a tab separated file?
Yes, I want to convert the output from SNPEff to be converted into a tab-separated file?
How should that tab-separated file look like? You'll have to be more specific!
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