Question: name of the figure
1
gravatar for yueli7
9 months ago by
yueli7160
China
yueli7160 wrote:

Hello, Everyone,

Anyone know the name of the figure?

Thanks in advance for any help!

Best,

Yue

Screenshot-from-2019-12-12-15-56-59

rna-seq • 283 views
ADD COMMENTlink modified 9 months ago by A. Domingues2.3k • written 9 months ago by yueli7160
1

Based on the information provided, it is either Figure 3. or Screenshot-from-2019-12-12-15-56-59. I may have a better suggestion if you provide more information.

ADD REPLYlink written 9 months ago by Mensur Dlakic6.4k
1

Clonal architecture plots for a tumor are also represented in this way. See SciClone paper as an example.

ADD REPLYlink modified 9 months ago • written 9 months ago by genomax89k
2
gravatar for A. Domingues
9 months ago by
A. Domingues2.3k
Dresden, Germany
A. Domingues2.3k wrote:

It looks like a fancy Sankey or alluvial diagram. This would be a more typical example: alluvial

And there is another in here: https://bioconductor.org/packages/release/bioc/vignettes/Director/inst/doc/vignette.pdf

ADD COMMENTlink modified 9 months ago • written 9 months ago by A. Domingues2.3k

Alluvial diagrams are a form of parallel coordinates diagram. You can plot them in R with the alluvial package or the ggalluvial extension of ggplot2.

ADD REPLYlink written 9 months ago by Jean-Karim Heriche23k
0
gravatar for c_u
9 months ago by
c_u260
United States
c_u260 wrote:

To me it looks like overlapping horizontal violin plots, that have been smoothed at the edges. This could be a design that Guardant360 came up with (the legend mentions that the figures were generated by Guardant360). Here is an example of a horizontal violin plot. You can read more about violin plots here - https://en.wikipedia.org/wiki/Violin_plot

ADD COMMENTlink written 9 months ago by c_u260
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