Chipseq Data On Prostate Cancer
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11.0 years ago
Bioinfosm ▴ 620

Am looking for chipSEQ data available for prostate cancer. Some of the encode data includes chipSEQ but is other tissues or cell lines.

Moreover, for the chipSEQ data, is there a well accepted process to identify the motif within the peak regions; because with the chipSEQ data, I would like to first identify the peak regions (if its not already available for that dataset) and then identify the binding sites within those peak regions, because those are the important regulatory nucleotides.

Thanks!

chip-seq cancer next-gen • 2.8k views
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11.0 years ago
JC 13k

Have you tried looking in the NCBI:GEO? http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE20042

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No I had not checked. Thanks!

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This respond concluded me to find a proper data set after 10 hours. Thank you ! Seriously I REALLY APPRECIATE YOUR CONTRIBUTION!

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