Review papers on the topic of RNA-seq
From RNA-seq reads to differential expression results (Dec 2010) in Genome Biology
RNA-Seq: a revolutionary tool for transcriptomics (2009) in Nature Reviews Genetics
RNA sequencing: advances, challenges and opportunities (2011) in Nature Reviews Genetics.
Tophat and Cufflinks
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks (March 2012) Nature Protocols
- Next-generation transcriptome assembly (2011). in Nature Reviews Genetics
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