Question: How And From Where Do I Download Reference Genome For Staphylococcus Aureus?
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gravatar for vibhanim.21
4.4 years ago by
vibhanim.2130
Manipal University
vibhanim.2130 wrote:

i am new to genome assembly work. i actually don't know actually how to download the reference genome for staphylococcus aureus and from where. please can anybody guide me ?

genome reference • 2.0k views
ADD COMMENTlink modified 2.5 years ago by Biostar ♦♦ 20 • written 4.4 years ago by vibhanim.2130

Where you download a reference genome depends largely on what reference genome you plan to work with. Which genome do you want?

ADD REPLYlink written 4.4 years ago by Josh Herr5.4k

i want to download staphylococcus aureus genome

ADD REPLYlink written 4.4 years ago by vibhanim.2130

Thank you for editing your question and question title.

ADD REPLYlink written 4.4 years ago by Josh Herr5.4k

welcome... i later had thought to be more specific in asking my question.. and thank you for the answer it was very helpful

ADD REPLYlink written 4.4 years ago by vibhanim.2130
4
gravatar for Josh Herr
4.4 years ago by
Josh Herr5.4k
University of Nebraska
Josh Herr5.4k wrote:

Here's the actual link to get the Staphylococcus aureus genome. Actually, this database (AureusDB) seems to be the definitive place for Staphylococcus genomes. It looks like there are actually a few at NCBI (and possibly elsewhere) that you can download, but it looks like there are all in AureusDB. On second look, the Broad Institute database looks very complete, as does the one from the Sanger Institute. You should check them all out.

ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by Josh Herr5.4k

thank you very much .... :) have a good day

ADD REPLYlink written 4.4 years ago by vibhanim.2130
1
gravatar for Biomonika (Noolean)
4.4 years ago by
State College, PA, USA
Biomonika (Noolean)2.9k wrote:

I would like to add this link with reference sequences for many species: http://hgdownload.cse.ucsc.edu/downloads.html (because you do not specifically mention staphylococcus in the title) for other people.

ADD COMMENTlink modified 4.4 years ago • written 4.4 years ago by Biomonika (Noolean)2.9k
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