Hi, since this thread is live again. Feel like I must also contribute with some updated/easy solution. (Note: Sorry, this is command-line solution)
You can retrieve complete list of GO terms with corresponding genes as plan text table format using GeneSCF's prepare_database module.
Download all GO terms and list of genes from human:
./prepare_database -db=GO_all -org=goa_human
If you like to retrieve genes only for you GO term list, grep your terms against GeneSCF downloaded table.
grep -fF PATH/YOUR_TERMS_oneTermPerLine.list PATH/geneSCF-master-source-v1.1-p2/class/lib/db/goa_human/GO_all_sym.txt > PATH/YOUR_TERMS_withGenes.table.txt
modified 4 months ago
4 months ago by
EagleEye ♦ 6.5k