agilent human all exon sureselct v7 bed file
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2.1 years ago
soheil • 0

Dear Biostars,

I wanted to analyse the coverage of the file in whole exome sequencing using bedtools. I noticed that I need the bed file of the kit that has been used for target enrichment, which is 'human all exon sureselect v7'. Since I am from Iran, due to sanctions, I could not register to the agilent website and download the bed file. I wonder if any one could help me and send the file. Or if there is another source, which I could use to get the bed file, I would really appreciate if you could guide me.

Thank you very much in advance

exon human bed v7 agilent all sureselect • 2.0k views
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2.1 years ago
ATpoint 83k

Bed For Agilent Sureselect All Exon Kits ?

Please use the search function and google first.

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Yes, I did that. In order to use the https://earray.chem.agilent.com/suredesign/search.htm, fir you should register. However, I could not register to the website from Iran. I have also checked the exomeprobesets in gbdb of UCSC website, but the 'human all exon sureselct vs7' is not listed there for downloading.

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I have uploaded the files here --for both hg19 and hg38-- for 'SureSelect Human All Exon V7'.

Kevin

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Dear Kevin,

Thank you very much for your sympathy and helpful link. I really appreciate your help.

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God bless you man.

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Apologies, I did indeed not think about these kinds of restrictions.

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