Normalization of Bigwig file
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8 weeks ago
daffodil ▴ 10

Hi,

I am wondering whether RPM or RPKM would be a suitable method of normalization for ATAC-seq data for generating BigWig files, and which would be preferable?

Best regards

ATAC BigWig • 330 views
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8 weeks ago
ATpoint 81k

My take on that: ATAC-seq sample normalization

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