updated 10 hours ago by
Ram
43k
•
written 5 days ago by
carolofharvest
▴
30
9
votes
9
replies
505
views
0
votes
4
replies
226
views
updated 17 hours ago by
Mensur Dlakic
★
27k
•
written 1 day ago by
Ruqaiya
•
0
2
votes
3
replies
227
views
updated 3 hours ago by
Gordon Smyth
★
7.1k
•
written 1 day ago by
SHN
▴
40
2
votes
3
replies
724
views
updated 13 hours ago by
vjanve
•
0
•
written 7 months ago by
mateomejias
•
0
0
votes
2
replies
142
views
2
votes
2
replies
173
views
updated 10 hours ago by
Ram
43k
•
written 1 day ago by
carolofharvest
▴
30
2
votes
2
replies
2.6k
views
4
votes
2
replies
119
views
6 hours ago by
lorena9132
▴
10
1
vote
1
reply
131
views
updated 10 hours ago by
Ram
43k
•
written 1 day ago by
adi.gershon1
•
0
0
votes
1
reply
116
views
updated 7 hours ago by
Mathew
▴
30
•
written 15 hours ago by
drajangirija
•
0
0
votes
1
reply
166
views
updated 22 hours ago by
Thanujay S
•
0
•
written 1 day ago by
yahn
•
0
0
votes
1
reply
138
views
0
votes
1
reply
132
views
0
votes
0
replies
14
views
0
votes
0
replies
67
views
0
votes
0
replies
66
views
0
votes
0
replies
58
views
0
votes
0
replies
90
views
updated 23 hours ago by
Ram
43k
•
written 1 day ago by
deepak180001
•
0
Recent Locations •
All
India, 1 minute ago
Russia, 3 minutes ago
United States, 13 minutes ago
Singapore, 19 minutes ago
USA, 21 minutes ago
China, 35 minutes ago
China, 49 minutes ago
Recent Awards •
All
Popular Question to
psm
▴
130
Popular Question to
Medhat
9.7k
Autobiographer to
Mathew
▴
30
Commentator to
dsull
★
6.0k
Scholar to
BioinfGuru
★
1.7k
Popular Question to
drajangirija
•
0
Popular Question to
Thanujay S
•
0
Recent Replies
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1))
It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴
10
Hi Mathew,
The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴
30
Hi,
I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴
30
Hi,
You asked three questions so I will attempt to help the best I can
**What should be the optimal GC score cutoff**
It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴
40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
•
0
I ran into same issue of "duplicated gene symbol(s)":
1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, :
22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴
10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★
27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
•
0
Hey @Ruqaiya!
Can you please give more details on why smalt is opted here?
According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
by
Thanujay S
•
0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
by
Ruqaiya
•
0
I tried the 2nd option only.
I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Traffic: 1243 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6