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5
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8 follow
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Resources to learn htslib and C/C++
c++ C htslib written 3.3 years ago by QVINTVS_FABIVS_MAXIMVS2.3k • updated 9 months ago by chernouhov sergey40
143
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14
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22k
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24 follow
14
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C/C++ Libraries For Bioinformatics?
C written 9.7 years ago by Daniel Swan13k • updated 10 months ago by chernouhov sergey40
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5 follow
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Minimal example of using htslib from conda to build a simple c file?
C conda htslib written 16 months ago by Click downvote670 • updated 16 months ago by John Marshall1.9k
12
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2
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Is there a single header file somewhere I can use to read bam?
bam C c++ written 16 months ago by Click downvote670 • updated 16 months ago by John Marshall1.9k
3
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558
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1
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GNU autotools and samtools/htslib
samtools configure C autotools htslib written 17 months ago by Pierre Lindenbaum126k • updated 17 months ago by John Marshall1.9k
2
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1
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727
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1
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Is there a code to find consensus motif
python C shell awk written 18 months ago by vinayjrao170 • updated 18 months ago by Carlo Yague4.9k
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5
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13 follow
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Which C++ Libraries Are Best For Dealing With Fastq Files?
fastq next-gen C sequencing written 9.9 years ago by Jeremy Leipzig19k • updated 19 months ago by cartoonist60
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9
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6 follow
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Faster reading sequences from a fastq file
fastq C written 2.1 years ago by brs111110 • updated 2.1 years ago by kloetzl1.1k
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extract_sv_reads/samblaster: explain this code please.
splicedread c++ C samblaster written 2.1 years ago by Pierre Lindenbaum126k • updated 2.1 years ago by gf4ea30
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Job: Computational Biologist / Bioinformatician, The Sanger Institute, Cambridge, UK
perl cc++ C job python written 2.5 years ago by Recruit230 • updated 2.5 years ago by genomax78k
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Job: Bioinformatician/ Senior Bioinformatician, Wellcome Trust Sanger Institute, Cambridge, UK
python oracle c++ C job written 2.7 years ago by Recruit230 • updated 2.7 years ago by genomax78k
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How Can I Apply A Pssm Efficiently?
pssm C written 7.8 years ago by glocke01170 • updated 3.1 years ago by Biostar ♦♦ 20
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error during installationi of KisSplice
c++ C rna-seq snp kissplice written 3.6 years ago by yoyofangliu0 • updated 3.2 years ago by vectorio91280
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C program to find complementary of DNA sequence
myposts C dna written 4.2 years ago by Arindam Ghosh200 • updated 4.2 years ago by Alex Reynolds29k
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4.7k
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1
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htslib C API: getting reads from region
C api samtools htslib written 4.6 years ago by QVINTVS_FABIVS_MAXIMVS2.3k • updated 4.6 years ago by Pierre Lindenbaum126k
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16 follow
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Tool: Quick statistics from the command line
C tool statistics written 4.6 years ago by Kamil2.0k • updated 4.6 years ago by Istvan Albert ♦♦ 82k
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1
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Blast implementation details help
C blast written 4.7 years ago by felipesulser0 • updated 4.7 years ago by h.mon29k
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1
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2.8k
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1
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Sequence Display Controls For C#/.Net
visualization sequence C windows written 8.9 years ago by Mark Anthony Gibbins130 • updated 4.9 years ago by Biostar ♦♦ 20
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Best HMM library for bioinformatics
hmm java C tool python written 5.2 years ago by Dave70 • updated 5.2 years ago by a.polo88110
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read multiple fasta sequence using kseq.h
kseq.h sequence C written 5.6 years ago by madhurima.das10 • updated 5.6 years ago by Alex Reynolds29k
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5 follow
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Implement Bgzip Into C Program
samtools tabix C written 7.4 years ago by FGV110 • updated 5.7 years ago by Biostar ♦♦ 20
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BLAST: Querying a single sequence without input file in C
C blast written 5.7 years ago by madhurima.das10 • updated 5.7 years ago by Pierre Lindenbaum126k
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How Reproducible Are The Results Programs Compiled With Blast Libs Vs Calling The Ncbi Binary?
C blast written 5.9 years ago by pld4.8k • updated 5.8 years ago by Biostar ♦♦ 20
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