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<prev • 16 results • page 1 of 1 • next >
7
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328
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Is there any precedent for considering marked duplicates when calculating coverage in high-depth whole-exome sequencing?
exome duplicates exome-seq coverage written 5 months ago by Dan D ♦ 6.6k
0
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0
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269
views
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Process the VCF files for a huge number of samples
vcf indel exome-seq snp written 7 months ago by wangdp123 • 120
4
votes
1
answer
742
views
1
answer
[solved] SnpEff reports intron variants in exons ?
annotation snpeff exome-seq snp written 12 months ago by badredda • 50 • updated 12 months ago by cpad0112 • 9.3k
0
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0
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520
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0
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Transcript consensus sequence for variant calling analysis
exome-seq sequencing written 19 months ago by bharata1803 • 310
3
votes
1
answer
686
views
1
answer
converting Indel Realigned Bam to fastq
next-gen exome-seq written 21 months ago by IP • 430 • updated 21 months ago by igor ♦ 6.8k
7
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2
answers
3.2k
views
9 follow
2
answers
frequently found false positives from exome seq
targetted-capture exome-seq written 4.2 years ago by poisonAlien • 2.6k • updated 23 months ago by Biostar ♦♦ 20
0
votes
0
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610
views
0
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How to get the number of RNA reads for mutations of exome-seq?
exome-seq mutation variant rna-seq written 2.0 years ago by agicict • 130
0
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0
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700
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0
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Exome Seq Data analysis - chromosome start and end positions
next-gen exome-seq rna-seq snp written 2.1 years ago by prathyushakonda • 0
6
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2
answers
1.3k
views
2
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Remove duplicates from exome sequencing data
variants sequencing exome-seq written 2.5 years ago by kulvait • 200
0
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1
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855
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1
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When is recommended to remove or keep Unpaired "Orphan" reads in downstream analysis?
exome-seq alignment samtools rna-seq snp written 2.5 years ago by fernardo • 110 • updated 2.5 years ago by Devon Ryan ♦ 85k
1
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934
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Finding miRNA motifs from Exome sequencing
sequence exome-seq mirna written 2.6 years ago by bharata1803 • 310
1
vote
0
answers
1.1k
views
0
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is it possible to define a window size in ADTex CNV tool?
adtex exome-seq cnv written 3.5 years ago by vchris_ngs • 4.5k
0
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819
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Is my understanding of mapping direction right?
alignment exome-seq written 3.6 years ago by wangyi2412 • 190
0
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2.7k
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VarScan output different when choosing VCF and variant missing?
variant calling varscan vcf exome-seq written 3.6 years ago by Pascal • 250
6
votes
3
answers
1.8k
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7 follow
3
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exome cnv analysis of cases only
case exome-seq cnv written 4.2 years ago by peris • 110 • updated 3.8 years ago by Vivek Todur • 40
4
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0
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1.5k
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0
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cn.mops error - Help !
cn.mops exome-seq r-bioconductor granges written 4.5 years ago by poisonAlien • 2.6k • updated 4.3 years ago by Biostar ♦♦ 20
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