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exome-seq • reset3
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Iñigo Prada • 330
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igor • 4.4k
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poisonAlien • 2.3k
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Recent Replies
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A: why would tped file from command plink --bfile [extenstion] --recode --tranpose by
alejandrotola • 0
Hei i got the same problem in R genABEL. **Error in convert.snp.ped(pedfile = "xxx.txt", mapfile...
-
C: assessing data quality of matched samples from different NGS platforms by
F • 2.6k
Thank you, I was ask this question. I think they mean assessing quality of data in matched sample...
-
A: using blastall option in terminal by
h.mon ♦ 7.2k
You either download and install [BLAST legacy][1], or adapt your command-line to BLAST+. With `bl...
-
C: tools for variant annotations by
world_genesis • 0
I asked for the "lesser" known ones since I did not want to miss out any from my list. The ones m...
-
C: tools for variant annotations by
h.mon ♦ 7.2k
Which are the greater known tools for variant annotation that you do know specifically? I know o...
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C: assessing data quality of matched samples from different NGS platforms by
genomax ♦ 30k
Why not use FastQC/MultiQC? Quality in what terms? Raw data/alignments/DE results?
-
C: Method for meta-analysis by
WouterDeCoster ♦ 20k
> impaired design Please elaborate on your experimental design. You are wasting your and my t...
-
C: Cis- eQTL Question by
WouterDeCoster ♦ 20k
Then it makes sense to look up how published methods do their job, and try to replicate that.
-
C: vcf-consensus wrong bases by
Pierre Lindenbaum ♦ 96k
give us an example.
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C: Reference for Salmon by
jh • 10
Thank you so much!! :D
-
C: AnnotationDbi using UCSC annotation by
jadepinket • 10
Below is the error I get, any suggestions would be helpful res$symbol <- mapIds(TxDb.Hsapiens...
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C: Are the UCSC genome assemblies non-redundant? How do I get a non-redundant genom by
rmartson • 0
Alright, I'll download the fasta file with random regions for the human genome as well then.
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