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Herald: The Biostar Herald for Monday, May 06, 2024
herald
4 days ago by Biostar 2.7k
4
votes
0
replies
146
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Herald: The Biostar Herald for Monday, April 29, 2024
herald
11 days ago by Biostar 2.7k
1
vote
1
reply
237
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Herald: The Biostar Herald for Tuesday, April 23, 2024
herald
updated 16 days ago by 161k • written 16 days ago by 2.7k
6
votes
0
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216
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Herald: The Biostar Herald for Monday, April 15, 2024
herald
25 days ago by Biostar 2.7k
3
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0
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182
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Herald: The Biostar Herald for Tuesday, April 09, 2024
herald
4 weeks ago by Biostar 2.7k
1
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0
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196
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Herald: The Biostar Herald for Wednesday, April 03, 2024
herald
5 weeks ago by Biostar 2.7k
3
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0
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219
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Herald: The Biostar Herald for Monday, March 25, 2024
herald
6 weeks ago by Biostar 2.7k
3
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0
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225
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Herald: The Biostar Herald for Monday, March 11, 2024
herald
8 weeks ago by Biostar 2.7k
4
votes
0
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308
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Herald: The Biostar Herald for Monday, February 26, 2024
herald
10 weeks ago by Biostar 2.7k
1
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0
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241
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Herald: The Biostar Herald for Tuesday, February 20, 2024
herald
11 weeks ago by Biostar 2.7k
2
votes
0
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269
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Herald: The Biostar Herald for Monday, February 12, 2024
herald
12 weeks ago by Biostar 2.7k
1
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0
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289
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Herald: The Biostar Herald for Wednesday, January 31, 2024
herald
3 months ago by Biostar 2.7k
3
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0
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307
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Herald: The Biostar Herald for Monday, January 22, 2024
herald
3 months ago by Biostar 2.7k
1
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0
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293
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Herald: The Biostar Herald for Monday, January 15, 2024
herald
3 months ago by Biostar 2.7k
2
votes
0
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333
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Herald: The Biostar Herald for Monday, January 08, 2024
herald
4 months ago by Biostar 2.7k
2
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1
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456
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Herald: The Biostar Herald for Tuesday, December 19, 2023
herald
updated 4 months ago by ★ 3.8k • written 4 months ago by 2.7k
4
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0
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369
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Herald: The Biostar Herald for Monday, December 11, 2023
herald
5 months ago by Biostar 2.7k
2
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0
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374
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Herald: The Biostar Herald for Monday, December 04, 2023
herald
5 months ago by Biostar 2.7k
3
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0
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382
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Herald: The Biostar Herald for Monday, November 27, 2023
herald
5 months ago by Biostar 2.7k
3
votes
0
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417
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Herald: The Biostar Herald for Monday, November 20, 2023
herald
5 months ago by Biostar 2.7k
3
votes
0
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404
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Herald: The Biostar Herald for Monday, November 13, 2023
herald
5 months ago by Biostar 2.7k
4
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0
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431
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Herald: The Biostar Herald for Monday, November 06, 2023
herald
6 months ago by Biostar 2.7k
2
votes
0
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452
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Herald: The Biostar Herald for Monday, October 30, 2023
herald
6 months ago by Biostar 2.7k
2
votes
0
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495
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Herald: The Biostar Herald for Monday, October 23, 2023
herald
6 months ago by Biostar 2.7k
3
votes
0
replies
458
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Herald: The Biostar Herald for Monday, October 16, 2023
herald
6 months ago by Biostar 2.7k
4
votes
1
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566
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Herald: The Biostar Herald for Monday, October 09, 2023
herald
written 7 months ago by 2.7k
3
votes
0
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509
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Herald: The Biostar Herald for Tuesday, September 26, 2023
herald
7 months ago by Biostar 2.7k
4
votes
0
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555
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Herald: The Biostar Herald for Wednesday, September 20, 2023
herald
7 months ago by Biostar 2.7k
4
votes
0
replies
502
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Herald: The Biostar Herald for Wednesday, September 06, 2023
herald
8 months ago by Biostar 2.7k
4
votes
1
reply
758
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Herald: The Biostar Herald for Monday, August 28, 2023
herald
updated 8 months ago by ▴ 770 • written 8 months ago by 2.7k
1
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0
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612
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Herald: The Biostar Herald for Thursday, August 24, 2023
herald
8 months ago by Biostar 2.7k
2
votes
0
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693
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Herald: The Biostar Herald for Wednesday, August 09, 2023
herald
9 months ago by Biostar 2.7k
1
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0
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805
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Herald: The Biostar Herald for Wednesday, August 02, 2023
herald
9 months ago by Biostar 2.7k
2
votes
0
replies
1.1k
views
Herald: The Biostar Herald for Thursday, June 15, 2023
herald
10 months ago by Biostar 2.7k
2
votes
0
replies
774
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Herald: The Biostar Herald for Monday, June 05, 2023
herald
11 months ago by Biostar 2.7k
1
vote
0
replies
844
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Herald: The Biostar Herald for Tuesday, May 23, 2023
herald
11 months ago by Biostar 2.7k
36 results • Page 1 of 1
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Answer: EdgeR - relationship between logFC and coefficients
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Answer: Server or aws cloud- which one is better for gatk pipeline
Comment: Question about methylation location
Comment: Question about methylation location
Comment: Question about methylation location
How to use minimap2?
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Recent Replies
Comment: fastq screen aligner no specified. by Ximena • 0
Thank u so much, my OS is linux. I will try your advice.
Comment: In IGV is this a heterogeneous mutation or false call? by Tuck898 • 0
No worries, I can completely appreciate that. I am having investigations similar to a condition causes by the RYR2 gene and was wondering i…
Comment: In IGV is this a heterogeneous mutation or false call? by Pierre Lindenbaum 161k
> RYR1 underneath although I was originally looking at the RYR2 gene. Sorry to sound stupid but does this make sense to what I've previousl…
Comment: In IGV is this a heterogeneous mutation or false call? by Tuck898 • 0
When click the blat it brings me to chr19 and mentions the RYR1 underneath although I was originally looking at the RYR2 gene. Sorry to sou…
Comment: In IGV is this a heterogeneous mutation or false call? by Tuck898 • 0
Thanks for that! I'll try and have a look and see what is amiss if I can... In your opinion what do you feel is wrong in my alignment from…
Comment: In IGV is this a heterogeneous mutation or false call? by Pierre Lindenbaum 161k
yeah.. look at that, there is something wrong in your alignment, many reads were mapped in a location but they are all clipped, so somethin…
Comment: Custom Reference panel creation for data imputation from .vcf files by analyst ▴ 50
Hi [Kevin][1]! I have 80 samples of GBS data. I have called variants through GATK pipeline. Now I have to perform imputation. Do I need …
Comment: In IGV is this a heterogeneous mutation or false call? by Tuck898 • 0
Ah I've just found 'show soft clipped bases' and this is what comes up... how come it is all greyed out? ![enter image description here][…
Comment: In IGV is this a heterogeneous mutation or false call? by Tuck898 • 0
I've just displayed clipped bases and this is what it shows. Does this look right? ![enter image description here][1] ![enter imag…
Comment: In IGV is this a heterogeneous mutation or false call? by Tuck898 • 0
Hi, I really appreciate you taking the time to reply. I'm still learning with IGV and sorry to sound very inexperienced but how would I che…
Answer: In IGV is this a heterogeneous mutation or false call? by Pierre Lindenbaum 161k
there is a clear shift in the depth just close to this mutation, you should set IGV to display the clipped bases + check if there is a DUP …
Comment: Too many unpaired forward reads found by Trimmomatic by SilhouetteQ • 0
Using fastp, I found that the adapter sequence for the forward read is corresponding to Trans2_rc in the NexteraPE-PE.fa, while for the re…
Comment: cellranger error message by Max • 0
I think the problem is your fastq_id. This should also read "RabhiN_PHLGEX". Hope this helps!
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK by Giulio Genovese ▴ 390
@yokofakun is correct. Also, do notice that the GATK option `--RECOVER_SWAPPED_REF_ALT True` does not work with indels. In general, if your…
Comment: How to format "I" and "D" in vcf version 4.2 for liftover analysis in GATK by Pierre Lindenbaum 161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
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