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Problem with Jannovar and downloading hg19 db
jannovar hg19 annotation written 12 days ago by bwczech • 40
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102
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Finding and changing a given position in hg19 ref fasta file
fasta reference hg19 written 4 weeks ago by cetin.m • 10
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TCGA CNV/SNP6 Reference Sequence - hg19
tcga reference genome snp cnv hg19 written 4.3 years ago by dirigible2012 • 310 • updated 5 weeks ago by Biostar ♦♦ 20
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Bowtie error: Could not locate a Bowtie index corresponding to basename
alignment chip-seq bowtie single-end hg19 written 5 months ago by cilgaiscan • 30 • updated 5 months ago by h.mon ♦ 22k
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why do bed files not contain information about the reference?
bed hg38 reference hg19 written 5 months ago by Marvin • 120 • updated 5 months ago by Friederike ♦ 2.4k
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Convert Wiggle File From Hg18 To Hg19
wiggle conversion hg19 written 5.4 years ago by zhouchan99 • 10 • updated 5 months ago by Alex Reynolds ♦ 27k
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What is the difference between GRCh37 and hs37? And hg19?
assembly hg19 hg38 reference genome hs37 written 5 months ago by juanfdelahoz • 20
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7 follow
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FeatureCounts on HG38
refseq star rna-seq hg19 written 6 months ago by elb • 160 • updated 6 months ago by h.mon ♦ 22k
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Gff Or Bed File For Hg19 Genome
genome seq gff hg19 written 5.4 years ago by rob.costa1234 • 150 • updated 8 months ago by h.mon ♦ 22k
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Finding hg19 coordinates for primers to make BED file
primers coordinates hg19 written 3.0 years ago by adnan.haider.ra • 10 • updated 9 months ago by bioinfo89 • 40
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6 follow
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Hapmap 3 in hg19/GRCh37 plink format PED and MAP
hapmap 3 hg18 map ped hg19 written 9 months ago by Shicheng Guo • 7.3k
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increase BWA sensitivity
metagenomics bwa hg19 written 9 months ago by sacha • 1.6k • updated 9 months ago by h.mon ♦ 22k
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hg19 exome reference and index
exome hg19 reference index written 11 months ago by genomics Newbie • 10 • updated 11 months ago by Kevin Blighe ♦ 35k
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GRCh37/hg19 human genome sequences from NCBI
ncbi hg19 written 13 months ago by KVC_bioinfo • 350 • updated 13 months ago by Jean-Karim Heriche ♦ 17k
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Looking for WIG base coverage file for hg19 to call CNVs in Exome data using EXCAVATOR
exome excavator wig cnv hg19 written 14 months ago by bioinforesearchquestions • 190
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Tell Canonical Isoform/Trancsript in gencode
canonical isoform grch37.hg19 gencode hg19 written 14 months ago by mollitz • 20 • updated 14 months ago by Emily_Ensembl ♦ 16k
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[hg19] Reading genes with CCDS
grch37 coordinates ccds hg19 written 16 months ago by mollitz • 20 • updated 16 months ago by Satyajeet Khare • 1.3k
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HG19 Annotation download with Gene Names.
genome annotation hg19 bed igv written 16 months ago by clear.choi • 30 • updated 16 months ago by genecats.ucsc • 560
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GTF file problem
gtf hg38 rna-seq hg19 written 18 months ago by johnsonn573 • 0
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Is 'hg19' the same as 'Human Genome Reference 38' ?
genome alignment grch38 hg19 sequencing written 18 months ago by ycsm • 10 • updated 18 months ago by skim • 20
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List of all known enhancers in human genome
enhancers hg19 written 2.8 years ago by jennifer rondineau • 20 • updated 18 months ago by Biostar ♦♦ 20
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1
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722
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HeLa reference fasta
reference hela hg19 written 19 months ago by Sergio Martínez Cuesta • 60
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List of house keeping genes for hg19
house keeping genes hg19 written 20 months ago by manali.rupji • 0 • updated 20 months ago by Santosh Anand ♦ 4.4k
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Reference Transcriptome for hg19
salmon transcriptome reference rna-seq hg19 written 21 months ago by stefanos.bamopoulos • 30
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Where can I find the HVR coordinates of mitochondrial DNA on the human genome?
hypervariable regions mtdna hg19 haplogroup chrm written 21 months ago by Glen • 20
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Comparing variants in vcf files that have been mapped to GRCh37 and GRCh38
vcf hg38 hg19 written 22 months ago by cl10101 • 70 • updated 22 months ago by Pierre Lindenbaum ♦ 116k
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Giemsa stain annotation/nomenclature for UCSC cytoband tracks
ggbio ucsc gviz hg19 written 23 months ago by maden.sean • 20
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Get hg19 coordinates of SNPs from gwas catalog
gwas catalog hg19 written 4.1 years ago by misconstruction • 20 • updated 2.0 years ago by Jack • 80
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Low counts with htseq-count?
htseq-count cufflinks hg19 written 2.1 years ago by longoka • 30
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Hg19 Strand Information Of Sam Output.
illumina paired-end sam hg19 written 4.9 years ago by Coryza • 20 • updated 2.3 years ago by Biostar ♦♦ 20
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