hicexplorer Posts

C: Phd Studentship in Dublin by genomax ♦ 31k
Can you please add the name of the institution, location and Country to the title of this post? S...
C: Visualizing genomic data: techniques and challenges. Our interview with Dr. Mala by Malachi Griffith ♦ 15k
Cross-link to the post with more details on the content of this course: https://www.biostars.org/...
C: Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany) by Malachi Griffith ♦ 15k
Cross linking to the interview post related to this course for convenience: https://www.biostars....
C: Can we predict/quantify transcription factor activation using gene expression da by James Ashmore • 1.7k
Without topological information, your results will be patchy at best. If you can't get any topolo...
C: Standard Deviation using log2 values by Santosh Anand • 2.7k
I'm not clearly understanding what are you doing. But, sd will surely be different if you "scale"...
A: snpEff inappropriate interpretation of variants? by rbagnall • 1.1k
In the second example, the ensEMBL transcript ENST00000575124 has a protein coding region that ex...
A: Dataset normalised to TPM (GSE85066) by h.mon ♦ 7.5k
See [Q: TPM to logFC and pvalues][1]. [1]: https://www.biostars.org/p/264885/
C: gffread error when extracting transcript sequences from gtf, coordinates exceed by jjrin • 10
It works great, thank you so much! The fixed annotation looks good (you have to remove mtDNA but ...
C: correlation between genes by h.mon ♦ 7.5k
Probably better to also use `method="spearman"` with `cor()`, just to be safe and avoid spurious ...
C: How to apply for a job by Emily_Ensembl ♦ 12k
No-one does that any more.
C: How to apply for a job by Jean-Karim Heriche ♦ 12k
And to show you really payed attention, spell it EnsEMBL :)
C: Dataset normalised to TPM (GSE85066) by Fabio Marroni • 1.3k
You can give a look here: https://www.biostars.org/p/189075/

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